Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04582 ATGGCGGAGCGTTCTTCCTCTTTTGGACTTGGTCCTCGATTAGATCTTCAGCAACTGCAGTTTGAAGCACAGCATCGGTGGTTGCGCCCTGCAGAAATATGTGAAATTCTTTGTAACTATCGTATCTTTCATATCACATCAGAACCACCAAACAGGCCACCAAGTGGTTCGCTTTTTCTTTTTGATAGGAAGGTTTTGAGATACTTCAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGACGGAAAGACTGTGAAGGAAGCTCATGAGAAGTTGAAAGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAATGAAAATTTTCAGAGGCGTAGCTATTGGATGCTTGAACCGGATATGATGCATATAGTATTTGTCCACTATTTGGATGTTAAGGTTAACAAGACCAATATCGGTAGAAATATTGATACAGATGAGGCTATGTCAGAATCCCAGAAGGGCAGTTCTGTGTTATCTGGCTTCCCCACAAGTTATAACAGCATGCCTTCTCGAAGTACAGATTCCATGAGTCCGACTAGCACTTTGACGTCATTATGTGAAGATGCTGATTCTGAGGATATTCGTCAAGCAAGTTCTGGAATGCACTCGTTTGGCAACCCTTTGGGGAGTGGTCAGGCAATGGATATCATTGATACTTGTTCAAATAGATCATATTTTATGCATCCCATTTCAGGTGATCATGGACAATCAACAATTTCTGTAACAGACTACATTCCACATGTCCAAGGGGATAAATCTAGATTAGGTATTACTGCTTACATTGAGGACCGAAAATCACATGTCATGCCATTAAGGGACACTATCACAGAGCAATCTGTTGGATTGTATACACCTTGTTCTTCCATTTCATCTGGTTCAAGGGGAAGCACCCTTGAACAAGAAAAAGCTGTTCCTGAGAATCTCTTCGGATCTAAAAGTGGCCTCAATGAGGAGTCAAGGGGTTCTCAGTCTACCCAGTCAAATTGGCAGATTACTTTTGATGAGAATACTGGACCTTTGCCAAGATGGAGCCTAACCGAATCGTTAAGTTTGGAATTTGAATCTGATTATAGCATGGCTTTATTTGGGGGTGAAACTGATAATGCAATTCCAGAGATTTGCCCTGACTTGTTCACTTCTAATGGAGAGCTAAAAGAGCAACCTGTGCAACAGAAGTTCCCAAAGCAGTCTACAGATGCACAATCTCAGCATGCACCAAGATCCGACAGTGAATATGAACTTCCTCGGGAGGATAGTGCTGGCTATTCCTTGAATGCAAAGCATGCATTACTGGATGGAGAGGAGAACCTGAAGAAGGTTGATAGCTTCTCAAGGTGGATTACTAAAGAACTTGGAGAGGTGGATGATCTGCATCTGCAGTCTTCCCCTGGTATTTCATGGAGCACAGATGAGTGTGGGCATGTAATAGATGATACATCATTGAACCCGTCCTTATCCCAAGATCAGTTGTTCAGCATAAGTGATTTTTCACCTAAATGGGCTTATGCAGATTCCGAGATTGAGGTGTTGATTATTGGAGCATTTTTGAAGAGTCAACTGGAGGTGGAAGCCTGTCACTGGTCCTGTATGTTTGGTGAAATTGAGGTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGAATTATGTGCTGTCAAGCTCCACCTCGTCAGGTTGGACGTGTACCTTTCTATGTGACCTGTTCCAATAGGTTTGCTTGTAGTGAAGTGAGGGACTTTGAGTTCAGAGAGGGATTTGCTAGGAATGTAGATTTTGCAGATTTTTTCTACAGTTCAACTGAAATGATGCTTCATTTGCGACTTGATGAGTTACTTTCTTCGAAATCAGTGCTATCTACTAATCAAGATTTTGAGGGTTATATGGAGACAAGAAACTTAATTTTTAAGCTCATCTCACTTAAAGAGGAAGAGGAATATTCACATAAGGAAGAGGCAACTGCAGGGTTGAGTGTATCACAACACAAATTGGAGGAGCATGTGTTTCACAGGAAGATTAAAGAGAAGCTCTACTCATGGCTTCTTCACAAGGTAACTGAAGGTGGTAAAGGGCCAAATGTATTAGACAAGGATGGTCAGGGTGTGTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATAACTCCAGTTATAACTGCTGGGGTTAATATCAACTTCCGTGATGTGAATGGATGGACAGCTTTACATTGGGCTGCATCCTGTGGCAGAGAGCGAACAGTTGCTGTCCTTGTCTCCATGGGTGCAGCAGCTGGAGCATTGACAGATCCAAGTCCAGCATTTCCTTCTGGTAGAACAGCTGCTGATCTTGCTTCTAGCAATGGACATAAAGGAATCTCTGGTTTTCTTGGAGAGTCATTATTAACTAGCCACCTTGCGTCACTTACAATGGATGATCCAAGTGAAGATGGCAGGAATAAAACTTTAGGTGGGAAAGCAGTGCAGACAGCTTCGGAGCGAAGTGCAACACCTCTACTTTATGGTGATGTATCAGATACTCTCTGCCTTAAGGATTCTCTTTCTGCTGTCCGTAATGCTACACAAGCCGCTGATCGCATACATCAAGTATTTAGGATGCAGTCATTTCAGAGGAAGCAGTTAGCTCAGTGTGAAGACGATGATGAGTTTGGATTGTCAGATCAACAAGTTCTTTCCTTTATAGCTTCTAGGGCTTGCAAATCTGGACAAGGAGAGGGTTTAGTGAATGCTGCTGCAACACAAATTCAGAAAAAATTTCGTGGTTGGAAGAAGAGAAAAGAATTCCTGATCATTCGCCAAAGAGTTGTCAAAATCCAGGCCCACGTAAGAGGTCACCAGGTAAGGAAGCAATACAAATTAATCTGGTCTGTTGGAATCCTAGAGAAGGTCATATTACGCTGGAGACGTAAGGGCAGAGGCTTACGTGGATTCCGACCAGATACCCTTAACATGGTCCCCAACCCACCAAGCAATCCTTCACAAGAGGATGACTATGATGTTCTCAAAGAAGGAAGGAAGCAAAGTGAAGAAAGGTTCCAAAAGGCCCTTTCAAGGGTGAAATCCATGGTCCAGTACCCGGAGGCACGTGCTCAATACCGGCGGGTGCTGAATGTAGTAGAGGACTTTCGTCAAACCAAGGTATTATATTTTCTAATATATGGATTATTGCCTATAGCATATGATTGA 3207 0.4216 MAERSSSFGLGPRLDLQQLQFEAQHRWLRPAEICEILCNYRIFHITSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWMLEPDMMHIVFVHYLDVKVNKTNIGRNIDTDEAMSESQKGSSVLSGFPTSYNSMPSRSTDSMSPTSTLTSLCEDADSEDIRQASSGMHSFGNPLGSGQAMDIIDTCSNRSYFMHPISGDHGQSTISVTDYIPHVQGDKSRLGITAYIEDRKSHVMPLRDTITEQSVGLYTPCSSISSGSRGSTLEQEKAVPENLFGSKSGLNEESRGSQSTQSNWQITFDENTGPLPRWSLTESLSLEFESDYSMALFGGETDNAIPEICPDLFTSNGELKEQPVQQKFPKQSTDAQSQHAPRSDSEYELPREDSAGYSLNAKHALLDGEENLKKVDSFSRWITKELGEVDDLHLQSSPGISWSTDECGHVIDDTSLNPSLSQDQLFSISDFSPKWAYADSEIEVLIIGAFLKSQLEVEACHWSCMFGEIEVXXXXXXXXXXXXXNGIMCCQAPPRQVGRVPFYVTCSNRFACSEVRDFEFREGFARNVDFADFFYSSTEMMLHLRLDELLSSKSVLSTNQDFEGYMETRNLIFKLISLKEEEEYSHKEEATAGLSVSQHKLEEHVFHRKIKEKLYSWLLHKVTEGGKGPNVLDKDGQGVLHLVAALGYDWAITPVITAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGAAAGALTDPSPAFPSGRTAADLASSNGHKGISGFLGESLLTSHLASLTMDDPSEDGRNKTLGGKAVQTASERSATPLLYGDVSDTLCLKDSLSAVRNATQAADRIHQVFRMQSFQRKQLAQCEDDDEFGLSDQQVLSFIASRACKSGQGEGLVNAAATQIQKKFRGWKKRKEFLIIRQRVVKIQAHVRGHQVRKQYKLIWSVGILEKVILRWRRKGRGLRGFRPDTLNMVPNPPSNPSQEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKVLYFLIYGLLPIAYD 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04582 1068 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 6 1054 - -
Aip03g04582 1068 MobiDBLite consensus disorder prediction 296 341 - -
Aip03g04582 1068 Gene3D Immunoglobulins 491 593 IPR013783 -
Aip03g04582 1068 ProSiteProfiles CG-1 DNA-binding domain profile. 16 142 IPR005559 GO:0003677
Aip03g04582 1068 Pfam IQ calmodulin-binding motif 917 935 IPR000048 GO:0005515
Aip03g04582 1068 Pfam IQ calmodulin-binding motif 940 959 IPR000048 GO:0005515
Aip03g04582 1068 ProSiteProfiles Ankyrin repeat region circular profile. 738 763 - -
Aip03g04582 1068 MobiDBLite consensus disorder prediction 388 413 - -
Aip03g04582 1068 SMART iq_5 937 959 IPR000048 GO:0005515
Aip03g04582 1068 SMART iq_5 914 936 IPR000048 GO:0005515
Aip03g04582 1068 Pfam Ankyrin repeats (3 copies) 710 793 IPR002110 GO:0005515
Aip03g04582 1068 SUPERFAMILY Ankyrin repeat 694 797 IPR036770 -
Aip03g04582 1068 Gene3D - 915 962 - -
Aip03g04582 1068 ProSiteProfiles IQ motif profile. 938 963 IPR000048 GO:0005515
Aip03g04582 1068 MobiDBLite consensus disorder prediction 378 423 - -
Aip03g04582 1068 Pfam CG-1 domain 22 135 IPR005559 GO:0003677
Aip03g04582 1068 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 914 961 IPR027417 -
Aip03g04582 1068 SMART CG_1_2 19 137 IPR005559 GO:0003677
Aip03g04582 1068 SUPERFAMILY E set domains 498 591 IPR014756 -
Aip03g04582 1068 MobiDBLite consensus disorder prediction 317 341 - -
Aip03g04582 1068 ProSiteProfiles IQ motif profile. 916 944 IPR000048 GO:0005515
Aip03g04582 1068 ProSiteProfiles Ankyrin repeat profile. 738 770 IPR002110 GO:0005515
Aip03g04582 1068 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 1 6 1054 - -
Aip03g04582 1068 MobiDBLite consensus disorder prediction 985 1004 - -
Aip03g04582 1068 MobiDBLite consensus disorder prediction 154 188 - -
Aip03g04582 1068 Gene3D - 674 804 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04582 Aip-Chr3 130106851 130115073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04582 1 1054 CAMTA Transcription Factor Family AT5G64220 52.825 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Aip03g04582 CG-1 1.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04582 K21596 - gmx:100795682 1525.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04582 03 130106851 130115073 Aip10g00807 10 9811265 9819502 PCT