Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04579 ATGGATAGTCTCTGTTGCTTCAGCTCTGTTAGAGGGGTGGTTGGAGGGCATTCTTCAAGTAACTCTGGAAAGGGCAAGAGCCATCAGTCTACAACCAAGTATGGCTATAGCCTTGTTAAAGGGAAAGCAAACCACCCGATGGAGGACTATCATGTAGCGAAATTTGTCCAGTTCAAGGGGCAAGAGCTGGGACTTTTTGCTATATATGATGGACACTTGGGAGATAGCGTACCAGCATATTTACAAAAGCATCTTTTTTCAAATATCTTGGATGAAAAGGACTTTTGGGAAGATCCGTTCATGTCTATTTCTAAAGCTTATGAGACAACAGATCAAGCAATTCTTTCTCACAGTCCTGATTTGGGACGAGGAGGGTCAACTGCTGTGACTGCAATTCTTATAAATAGTCAGAAATTATGGGTAGCCAACGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACAGATGACTACTGACCATGAACCTAATACTGAGCGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTTGCAAGGGTGAATGGGCAGCTTGCAGTTTCGCGAGCATTTGGAGACAGAAACCTCAAAACACATCTGCGATCGGATCCTGACATCCAGTATGCCGATATTAACCCAAATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGGAAACCAAGAGGCTGTAGATATTGCAAAAAGGATAAAGGATCCACAAAGGGCAGCCAAACAACTAGCCACTGAGGCATTGAACAAAGACAGTAAAGATGACATTTCATGCATTGTAGTTCGTTTCAAGGGATGA 849 0.4405 MDSLCCFSSVRGVVGGHSSSNSGKGKSHQSTTKYGYSLVKGKANHPMEDYHVAKFVQFKGQELGLFAIYDGHLGDSVPAYLQKHLFSNILDEKDFWEDPFMSISKAYETTDQAILSHSPDLGRGGSTAVTAILINSQKLWVANVGDSRAVLSRGGVAVQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDRNLKTHLRSDPDIQYADINPNIELLILASDGLWKVMGNQEAVDIAKRIKDPQRAAKQLATEALNKDSKDDISCIVVRFKG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04579 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Aip03g04579 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Aip03g04579 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Aip03g04579 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Aip03g04579 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
Aip03g04579 282 SUPERFAMILY PP2C-like 29 281 IPR036457 -
Aip03g04579 282 CDD PP2Cc 33 280 IPR001932 -
Aip03g04579 282 SMART PP2C_4 29 278 IPR001932 -
Aip03g04579 282 Gene3D - 15 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04579 Aip-Chr3 130091118 130094659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04579 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.06e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04579 K17506 - gmx:100801722 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04579 03 130091118 130094659 Aip10g00806 10 9805749 9808293 PCT