Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04575 ATGACCTTCCCTGACTATTATGAGCCTAGTTCTATTGCTGTTGAATCTAATCATAATAAACAAGAATTTGTTACCATTGAGGAGGAGGGTATATTTTTGACATGGAAGGATTTGCACGTGAGTGTTCCAAGTGGAAAGAAATATGCATATGGTCGGAAACCAATATTGAAGGGTTTAACTGGCTATGCTAAGCCAGGCCAACTCTTGGCTATTATGGGTCCTTCTGGCTGCGGCAAGTCCACACTTCTTGATGCCTTAGCTGGAAGATTGGGTTCAAGCACAAAGCAAACAGGGAAGATTCTGATTAATGGTCGGAGAGAAGCACTGGCTTATGGAACATCGGCATACGTAACACATGATGATGCCGTATTAGCAACACTGACAGTTGGAGAAGCAGTGAACTACTCAGCGCAGCTTCAATTTCCAAACTCAATGTCGAAGAGAGAGAAGGAAGAGAGAGCAATCTCTACAATCACACAAATGGGTCTGCAAGATGCCACCAACACAATGATTGGAGGGTGTTTGTCGAAAGGCCTCAGTGAGGGACAAAAGAGGAGACTCAGCATTTGCATTCAGATTCTCACCAGCCCAAGCCTTCTCCTTCTTGATGAACCAACTAGTGGACTTGATAGTGCTGCTTCCTACTATGTCATGACCAGAATTGCAAGTCTAAAGACAAGAGATGGCATCAAAAGAACCATTGTTGCATCCATTCATCAACCTAGTAGTCAGCTTTTTCAACTCTTTCAAGACCTTTGCCTTCTCTCTTGCGGTGAGACTGTATATTTTGGCCCCACTTCTGCAGCTACAAAGTTTTTTGCTTCACGTGGCTTTCCTTGTCCACCTCTCCACAACCCTGCTGACCATTTCTTGAGGATCATAAACAAGGATTTCAAAATGGTCGAAGAAGACTGTTTCCACATAGGAATGAAGAATGAAGATACCTTTAAGATCCTTGTGAAGTTTTATTCATCATCTAAAATTAGTAAGCAAGTCCGGAAGGAAGTAGCAACAATATGTGAAAAAGAATATGGTTTTGTGGAGAGGAAAAGAAGACAAGCTTCGTTTATAACTCAGTGCAACATTCTTTTGAGAAGATCTTCGCTACACTTATTTCGTGATGTAAGCAATTACTGGTTACGCATAGCAATCTTTACCATAGCAGCTCTAAGTCTGGGCACTATCTTCTTAGATGTCACTTCAAGTGATGCATCAATTCAGGCTAGAGGATCTCTGGTCTCTTTTGTTGCATCAGTCCTAACTTTCATAACCCTTCTTGGTGGATTCCCCCCATTTGTGGAGCAAATGAAGGTATACCAGCGTGAGAGATTGAATGGCCATTATGGTGTTTCTGCATTTGTGATCAGCCAAACACTATCTCCTGTTCCATATGTGCTATTAATGTCACTGATTCCGGGAGTAATAGCATACTACCTCTCTGGACTCCACAGAGGCCTTGAACGCTTCATGTACTTCTCTTTTGTGTTATTTGCATGTGTGATGTGGGTTGAAAGCCTCATGATGGTTGTTTCAAGTGTTTTCTCCAACCCCAACATGGGAATCACAATCTGTGGTGGAATTGTGGGAGTGATGATCCTAACTGCTGGGTTCTATAGGCTGCCAAATGATCTCCCAAAACCATTTTGGAAATATCCCATGTACTTTGTTTCTTTTCATAAGTATGCATTCCAAGGATTGTTCAAGAATGAGTTTCTTGGATTAACGTTGGCTAGAGATCAAGGTGGAGACAGAGGCACCTATATTGGTGATAAAGAGATACTGAGAAATATATGGCAAGTGGAAATGGGACACAATAAGTGGGTTGATCTTGCTATCATGTTTGGGATAATTGTTTTCTATAGGCTCATGTTCTTGGCAATCACCAAGATTAAAGAGAAGATAAAGGCTTGA 1911 0.4165 MTFPDYYEPSSIAVESNHNKQEFVTIEEEGIFLTWKDLHVSVPSGKKYAYGRKPILKGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSSTKQTGKILINGRREALAYGTSAYVTHDDAVLATLTVGEAVNYSAQLQFPNSMSKREKEERAISTITQMGLQDATNTMIGGCLSKGLSEGQKRRLSICIQILTSPSLLLLDEPTSGLDSAASYYVMTRIASLKTRDGIKRTIVASIHQPSSQLFQLFQDLCLLSCGETVYFGPTSAATKFFASRGFPCPPLHNPADHFLRIINKDFKMVEEDCFHIGMKNEDTFKILVKFYSSSKISKQVRKEVATICEKEYGFVERKRRQASFITQCNILLRRSSLHLFRDVSNYWLRIAIFTIAALSLGTIFLDVTSSDASIQARGSLVSFVASVLTFITLLGGFPPFVEQMKVYQRERLNGHYGVSAFVISQTLSPVPYVLLMSLIPGVIAYYLSGLHRGLERFMYFSFVLFACVMWVESLMMVVSSVFSNPNMGITICGGIVGVMILTAGFYRLPNDLPKPFWKYPMYFVSFHKYAFQGLFKNEFLGLTLARDQGGDRGTYIGDKEILRNIWQVEMGHNKWVDLAIMFGIIVFYRLMFLAITKIKEKIKA 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04575 636 Gene3D - 43 274 IPR027417 -
Aip03g04575 636 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 636 - -
Aip03g04575 636 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 26 636 - -
Aip03g04575 636 Pfam ABC transporter 56 207 IPR003439 GO:0005524
Aip03g04575 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 282 IPR003439 GO:0005524
Aip03g04575 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 274 IPR027417 -
Aip03g04575 636 SMART AAA_5 65 266 IPR003593 -
Aip03g04575 636 Pfam ABC-2 type transporter 239 298 IPR043926 GO:0140359
Aip03g04575 636 Pfam ABC-2 type transporter 358 571 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04575 Aip-Chr3 130058652 130062712 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04575 48 243 Calmodulin-binding Proteins AT2G36910 26.761 2.87e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04575 K05681 - adu:107481533 1161.75