Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04571 ATGGATTCCCATCATGAAGCAATTCCACATGCTTCTACTAGGAGTGATTCTGATGATGATGTCATAGAGATTAATAATGTTGATGAGAGCAACAGAGAAGGAGTAGTAGCGGTGATGGAAGGTTTGAACATTTCAAGAAGTAGTAATAGTGGTGGGAGAGAAGAAGAGGTTCCAATATACATGACATGGAAGGATGTATGGGTGGGAAAGAATGAGAGCAAATCGATCCTGGAGGGTCTGACTGGTTATGCCAAGCCAGGCCAGCTTTTGGCCATTATGGGTCCTTCTGGATCTGGCAAGTCTACTCTTCTTGATGCTTTGGGAGGGAGATTAAGTTCAAACACAAGACAAACAGGGAAGATTCTAATCAATGGTCGCAAGCAATCATTGGCTTATGGAACCACGGCATATGTGACACAAGATGATAGCTTAATAACATCATTAACAGTGAGAGAAGCAGTGTACTATTCAGCTCAGCTTCAGTTGCCTGATTCCATGTCAAAGGCAGAGAAGAAAGAGAGAGCAGAGTTCACAATTAGAGAGATGGGTTTGCAAGATGCCATCAACACTAGAATTGGTGGCTGGGGTTGCAAAGGAATCAGCGGTGGTCAGAAGAGACGTGTAAGCATCTGCATTGAGATACTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCCTCTTACTATGTCATGAAAAGAATTAAATCTCTTGATCATAAAGATGGTATTCAAAGGACTATCATAGCTTCAATTCATCAGCCAAGTGCTGAAGTTTTTCAATTCTTTGATAATCTCTGTTTGCTCTCTGCTGGCAAAACAGTTTACTTTGGACCTGCTTCTGATGCAATTCAGTTTTTCGCTTCCAATGGTTTTCCTTGTCCTGCTCTTCAAAACCCCTCAGATCATATGCTAAAAACTATAAACAAGGACTTCGATCAGGAAAATGAGCTGGCTCCTGATGATGGTGGGAATGGAATCATACCAACAGAAGAAGTAATCCGGATTCTTGTAAACTCATATAACTCATCTGAGATGAACCAACAAGTTCAAGCTGAAGTAGCAATGCTTTCTGAAACGGAAAGTATTTGCCAAGACAAGAAGAGAAGTCATGGTGGGTTTATTAGTCAGTGCATTGTTCTGAGCAAAAGATCATTCCTAAACATGTCTCGTGATTTAGGCTATTACTGGATACGCCTTGTCGCATATATGGGGATGGCTATTTGTTTAGGAACTGTCTTCTATGATATAAGCACCACCAATAACTCAATTAAGGACAGAGGTTCATTTCTTACATTTGTGTCTACATTCATGACTTTCATGAGCATCGGTGGATTCCCTTCCTTTGTAGAAGACATGAAGGTATTTGAACGAGAAAGGCTAAATGGGCATTATGGTGTGTGCGCCTTTGTAATTGGAAACACATTATCCGGCATCCCATTCGTATTACTAGTTTCATTGATTCCGGGAACAATTGCATATTACCTAGCTGGCCTTCAAAATGGATGCAAGCAAGTTGTTTACTTCTTGAGCGTGTTGTTATCTTGTGTTATGTTAGTGGAAAGCCTCATGATGATAATTGCTGCCATAGTCCCAAACTACCTATTGGGAATCATGACAGGTTCTGCAATCCAAGGACTCATGATTCTGCTTGCTGGCTTCTTTAAATTGCCCAGTGACATTCCTAGGCCACTTTGGAAATACCCTTTGCACTACATGGCTTTCCATCGATATGCCTTTCAAGGATTGTTCAAGAACGAATTTCAAGGCCTAAAGTTTGCTACCAAAAACAACAATATTATTGTTACTGGTGAGGAGATTCTGAGGGACACATTTGAAGTGGACAACAGTTACTCAAAGTGGCTTGATCTATTAGTGTTGGTGGGGATGCTTGTTTTGTATCGAGTTCTATTTTTGGTTATCATTAAGGGTACGGAGAAGGTTAAGCCTTTTGTTGCATCCTTCAAACTGGTGTCTCCCAAGAAAACAATACATGTCATGGAAAATCCAAATGCCACCCCTCCTACTCATGGACACTACCTTGTATAA 2070 0.4106 MDSHHEAIPHASTRSDSDDDVIEINNVDESNREGVVAVMEGLNISRSSNSGGREEEVPIYMTWKDVWVGKNESKSILEGLTGYAKPGQLLAIMGPSGSGKSTLLDALGGRLSSNTRQTGKILINGRKQSLAYGTTAYVTQDDSLITSLTVREAVYYSAQLQLPDSMSKAEKKERAEFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIKSLDHKDGIQRTIIASIHQPSAEVFQFFDNLCLLSAGKTVYFGPASDAIQFFASNGFPCPALQNPSDHMLKTINKDFDQENELAPDDGGNGIIPTEEVIRILVNSYNSSEMNQQVQAEVAMLSETESICQDKKRSHGGFISQCIVLSKRSFLNMSRDLGYYWIRLVAYMGMAICLGTVFYDISTTNNSIKDRGSFLTFVSTFMTFMSIGGFPSFVEDMKVFERERLNGHYGVCAFVIGNTLSGIPFVLLVSLIPGTIAYYLAGLQNGCKQVVYFLSVLLSCVMLVESLMMIIAAIVPNYLLGIMTGSAIQGLMILLAGFFKLPSDIPRPLWKYPLHYMAFHRYAFQGLFKNEFQGLKFATKNNNIIVTGEEILRDTFEVDNSYSKWLDLLVLVGMLVLYRVLFLVIIKGTEKVKPFVASFKLVSPKKTIHVMENPNATPPTHGHYLV 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04571 689 Pfam ABC-2 type transporter 384 595 IPR013525 GO:0016020|GO:0140359
Aip03g04571 689 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 61 303 IPR003439 GO:0005524
Aip03g04571 689 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 40 681 - -
Aip03g04571 689 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 40 681 - -
Aip03g04571 689 ProSitePatterns ABC transporters family signature. 200 214 IPR017871 GO:0005524
Aip03g04571 689 SMART AAA_5 86 280 IPR003593 -
Aip03g04571 689 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g04571 689 Pfam ABC transporter 79 228 IPR003439 GO:0005524
Aip03g04571 689 Gene3D - 52 298 IPR027417 -
Aip03g04571 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 295 IPR027417 -
Aip03g04571 689 Pfam ABC-2 type transporter 260 316 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04571 Aip-Chr3 130000562 130005026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04571 43 242 Calmodulin-binding Proteins AT2G36910 28.972 5.49e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04571 K05681 - gmx:100813462 910.983