Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04570 ATGGCTTCTCTTCATCATCACCCTCTTCCATATTCTGAAGCCAAACCCAACAATTCAATTGTTCTAGAGATTCATCATGATGAGACCATCACTACTACTAGTAGTGCTGTGGCACATATGGAGGAGGCTTCAAGAAAGAGCAATGGAGAAGAGAAGAGCAATCCTATCTGTTTGACATGGAAGGATCTTTGGGTGAGGGCTTCCATGGGGAAGAGAGGGACCAAAGCTATCCTTCAGGGGCTAACCGGTTATGCCAAACCGGGTCAGCTCTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCAACACTTCTTGATACTTTAGCAGGTAGATTGGGTTCAAACACAAGACAAACCGGAGAGATTCTTGTCAATGGTCACAAACAATCACTGGCTTATGGAAGCACGGCATATGTGACACAAGATGATACCTTATTAACAACCTTAACGGTGAGGGAAGCAGTGCACTACTCAGCTCAACTCCAACTACCTGATTCCATGTCCAAGGCAGAGAAAAGAGAGAGAGCAGAGATTACAATAAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGAATTGGAGGTTGGGGCATTAAAGGAATCAGTGGTGGTCAGAAGAGACGTGTGAGCATCTGCATTGAGATCCTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCTTCCTATTATGTCATGAAAAGAATTGCAAACCTTGTTCAGAAAGATGGCATTCAAAGAACCGTTATTGCTTCAATACATCAACCAAGCACTGAAGTCTTTCAACTTTTCCATAACCTTTGTCTTCTCTCTTCTGGTACAACTGTTTACTTTGGACCTGCCTCAACTGCTACTCAGTTTTTTGCTTCCAATGGTTTTCCATGTCCTGCACTCCAAAACCCTTCTGATCATTTACTGAAAACAATAAACAAGGATTTTGATCAGGATACTGACATGGGTTTATCTGGCACTAGAACAGTGCCTACAGAAGAAGCAATTAGAATCCTTATAAGCGCATATGAATCATCTGAAATTAACCAACAAGTTCAACAAGAAGTTGCAATGCTATCTAACCAGGAGACTAGATCAGTAGATCATAAGAAGAGAAGGCGTGCTGGTTTCCTTAATCAGTGCATTGTTCTTACCAAAATATCATGCGTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGTCTTGGAATATACATTGCATTGGCCATAGCCACTGCCACAGTTTTCTATGATCTAGGTACAAGTTTCAGCACAATTCAGGACAGAGGAGCACTTCTTATGTTTGAATCTTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAGGTCATGAAGGTATTTGAACGAGAAAGATTGAATGGGCATTATGGTGTTGTGGCATTTGTAATTGGGAACACAGTATCTAGTGTGCCATACTTGGTTCTAGTATCAGTGATTCCAGGAGCCATAGCTTATTACCTTCCTCATCTTCAAAGAGGATTCGACCATTTTGTTTACTTCATATGTGTTCTGTTTTCTTGCCTCATGTTGGTTGAAAGCCTAATGATGATAGTTGCAAGCGTAGTCCCAAACTATCTAATGGGAATCATAAGCGGCGCCGGAATCCAAGGAATCATGATGCTGGCCGGAGGGTTCTTCAGATTGCCCAATGATCTTCCCAAACCATTTTGGAGATACCCAATGTTCTATGTTGCATTTCATAGATTTGCATTCCAAGGATTGTACAAGAACGAGTTTCAGGGGCTAAGCTTTGCAACAAATGATGGAAATGGCTCCTACATTAGTGGTGACCAGATTCTGAGGGACACGTGGCAAGTTGACATGAGTTACTCCAAGTGGGTCGATCTCGGAATCTTGCTTGGGATGATTTTGGTGTATCGAGTGTTGTTCTTCTTGATCATCAAGATTACGGAGAAGTTGAAGCCATTTTTTGTGTCATTCATTTCAGGGTCTCCCAAGCGAGCAACACTAGTGATGGAGAATAATGATGATAACTCTGCACTAAGTCATGAAGCATAA 2067 0.4214 MASLHHHPLPYSEAKPNNSIVLEIHHDETITTTSSAVAHMEEASRKSNGEEKSNPICLTWKDLWVRASMGKRGTKAILQGLTGYAKPGQLLAIMGPSGCGKSTLLDTLAGRLGSNTRQTGEILVNGHKQSLAYGSTAYVTQDDTLLTTLTVREAVHYSAQLQLPDSMSKAEKRERAEITIREMGLQDAINTRIGGWGIKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIANLVQKDGIQRTVIASIHQPSTEVFQLFHNLCLLSSGTTVYFGPASTATQFFASNGFPCPALQNPSDHLLKTINKDFDQDTDMGLSGTRTVPTEEAIRILISAYESSEINQQVQQEVAMLSNQETRSVDHKKRRRAGFLNQCIVLTKISCVNMFRDLGYYWLRLGIYIALAIATATVFYDLGTSFSTIQDRGALLMFESSFITFMTIGGFPSFVEVMKVFERERLNGHYGVVAFVIGNTVSSVPYLVLVSVIPGAIAYYLPHLQRGFDHFVYFICVLFSCLMLVESLMMIVASVVPNYLMGIISGAGIQGIMMLAGGFFRLPNDLPKPFWRYPMFYVAFHRFAFQGLYKNEFQGLSFATNDGNGSYISGDQILRDTWQVDMSYSKWVDLGILLGMILVYRVLFFLIIKITEKLKPFFVSFISGSPKRATLVMENNDDNSALSHEA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04570 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 304 IPR003439 GO:0005524
Aip03g04570 688 SMART AAA_5 87 276 IPR003593 -
Aip03g04570 688 Gene3D - 43 299 IPR027417 -
Aip03g04570 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 23 679 - -
Aip03g04570 688 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 23 679 - -
Aip03g04570 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 295 IPR027417 -
Aip03g04570 688 Pfam ABC-2 type transporter 261 366 IPR043926 GO:0140359
Aip03g04570 688 ProSitePatterns ABC transporters family signature. 201 215 IPR017871 GO:0005524
Aip03g04570 688 Pfam ABC transporter 79 229 IPR003439 GO:0005524
Aip03g04570 688 Pfam ABC-2 type transporter 384 595 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04570 Aip-Chr3 129967922 129986211 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04570 88 265 Calmodulin-binding Proteins AT2G36910 29.570 4.89e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04570 K05681 - gmx:100813462 991.875