Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04566 ATGGGAGAGGGAGAAGAAAAGGAAGACGTAACAGTGACATGGCAGAATTTGTGGGTTACTGTTGCAGATGGAAACAAAAGGAAACCAATTCTGCAGGGTCTCACCGGTTATGCTCAACCGGGGAAGCTTTTGGCCATAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATGCCTTATCAGGGAGATTAAGCTCTAGCGTCAAACAGACCGGTAAAATTTTAATCAATGGCCACAAACAAGCACTGGCTTATGGAACTTCGGGATATGTAACACAAGATGATGCTATGCTGTCAACTTTGACCGCTGGGGAAACTTTATACTACTCAGCTCAGCTCCAGTTTCCAGATTCCATGTCCACTTCTGAGAAGAAGGAACGAGCTGATATAACACTGAGGGAAATGGGACTCCAAGATGCCATTGACACAAGGGTTGGAGGATGGGGTTCTAAAGGCCTAAGTGGTGGACAAAAGAGGAGACTCAGCATCTGCATTGAGATCCTAACACGCCCAAAGCTTCTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCCTATTATGTCATGAAAAGAATTGCAAGCCTAAGCCTAAGGGATGGCATCCAAAGAACTATTGTTGCTTCAATCCATCAACCTAGTAGTGAAGTCTTTGAACTCTTCCATGATCTCTGTCTTCTGTCTTCTGGTCAAGCAGTATATTTTGGTCAAGCGTCTCATGCTAATCAGTTTTTTTCTTCAAATGGCTTTCCTTGCCCAGCTCTCCACAATCCCTCTGATCATTACTTAAGGATCATAAACAAAGATTTTGACCAAGATGTTGAAGAAGGTTTTGGATTCGGAGTTACTGCTGAAGTAGCAATTGACATCCTTGTAAAGTCTTATGGGTCATCTGAGATTAAAAACCAAGTTAATAATGTAGTGGCAACAATAACTGAAAGTAATTCAGGAGCAGTTGGGAAGAAGAGGGTCAATGCCACATTCCTCACTCAGTGCCTCGTTCTTATGAGAAGATCTTCGCTGCGATTGTTTCGCGACTTGAGCAATTACTGGTTGCTTCTTGTTGTCTTTATTGCAGTAGCTATTAGCATGGGTTCCATGTTCTATAACATTGGCTCAAGTAATGGATCAATTCAAGGAAGAGGGTCTCTGCTTACTTTTTTGATATCAACTCTGGCTTTCATGGCTCTTATTGGTGGATTCGCTCCATTAATGGAGGAAATGAGGGTATTTGAAAGAGAGAGACTAAATGGTCACTATGGTATTATTGCTTTTCTCACAGGCAAAATATTCTCAGCACTTCCATATATGCTAATGATTTGTCTAATTCCTGGAGGAATAATATATTACCTCTCAGGGCTGCAGAGAGGTTTAGAACACTTTGTGTACTTTGCTTCTGTTCTGTTTGCCATTGTGCTTTGGGTTGAGAGCCTCATGATGGTTGTGGGGAGTATGTTCCCCAATTTCGTAACCGGCATGAGCATTGCCGGCGGAATTCAAGGACTAACCATCTTAACTGGTGGATTCTACAGGCTGCCAAACGATCTTCCAAAACCATTTTGGAAATACCCCTTTTACTACCTTTCATTCCTTAAGTATGCTTTCCAAGGATCTTTCAAGAATGAATTTGAAGGCTTAAAATTTTCCATGGAACAAGGTGGAAGTGCAAAAACCATTGTTAGTGGTAGAGACATTTTGACAAACACATGGCAGGTGGAAATGGGGCATTCCAAGTGGGTTGATCTTGCCATCATGTTTGGGATGATTCTTGTTTATAGGGTTGTGTATTTGGCTATTACAAAAAGCAAGGAGAAGTTGAAACCTCTTGCTGCTTCCATTAACAATCACCCAACAAAAGTTTTCACGAGAGAGATTAGAATTAATGATAGAGCAAGCCCTGTATCTGAAAACCATGCTATCTTAGAATAA 1938 0.4164 MGEGEEKEDVTVTWQNLWVTVADGNKRKPILQGLTGYAQPGKLLAIMGPSGCGKSTLLDALSGRLSSSVKQTGKILINGHKQALAYGTSGYVTQDDAMLSTLTAGETLYYSAQLQFPDSMSTSEKKERADITLREMGLQDAIDTRVGGWGSKGLSGGQKRRLSICIEILTRPKLLFLDEPTSGLDSAASYYVMKRIASLSLRDGIQRTIVASIHQPSSEVFELFHDLCLLSSGQAVYFGQASHANQFFSSNGFPCPALHNPSDHYLRIINKDFDQDVEEGFGFGVTAEVAIDILVKSYGSSEIKNQVNNVVATITESNSGAVGKKRVNATFLTQCLVLMRRSSLRLFRDLSNYWLLLVVFIAVAISMGSMFYNIGSSNGSIQGRGSLLTFLISTLAFMALIGGFAPLMEEMRVFERERLNGHYGIIAFLTGKIFSALPYMLMICLIPGGIIYYLSGLQRGLEHFVYFASVLFAIVLWVESLMMVVGSMFPNFVTGMSIAGGIQGLTILTGGFYRLPNDLPKPFWKYPFYYLSFLKYAFQGSFKNEFEGLKFSMEQGGSAKTIVSGRDILTNTWQVEMGHSKWVDLAIMFGMILVYRVVYLAITKSKEKLKPLAASINNHPTKVFTREIRINDRASPVSENHAILE 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04566 645 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524
Aip03g04566 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 247 IPR027417 -
Aip03g04566 645 Pfam ABC-2 type transporter 214 270 IPR043926 GO:0140359
Aip03g04566 645 Pfam ABC transporter 32 182 IPR003439 GO:0005524
Aip03g04566 645 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 12 257 IPR003439 GO:0005524
Aip03g04566 645 Pfam ABC-2 type transporter 333 546 IPR013525 GO:0016020|GO:0140359
Aip03g04566 645 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 6 611 - -
Aip03g04566 645 SMART AAA_5 40 233 IPR003593 -
Aip03g04566 645 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 6 611 - -
Aip03g04566 645 Gene3D - 2 251 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04566 Aip-Chr3 129950126 129953113 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04566 30 243 Calmodulin-binding Proteins AT2G36910 25.778 1.20e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04566 K05681 - gmx:100790102 956.822