Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04564 ATGAACAAGCTTCTTGATCCCTCAACAGAAAGCCACATAGGCATTACTGAGGGAGAAGGTATAACAGTGACATGGGAGAACTTGTGGGTCACTGTTGCTGATGGAAAGAAAACGAAACCAATTCTGGAAGGTCTTACCGGTTATGCACAACCAGGGAGGCTTTTGGCTATAATGGGACCTTCTGGTTGTGGCAAATCCACACTTCTTGATGCCTTATCAGGAAGATTGAGCCCAAACATAAAGCATAAAGGGAATATTCTAATAAATGGGCACAAACAAGAACTGGCTTATGGAATATCAGGATATGTAACACAGGATGATGCTTTGCTTTCAACTTTAACAGCTCAGGAGACTTTATACTACTCAGCTCAGCTTCAGTTCTCTGATTCCATGCCCATATCAGAGAAGAAGGAAAGAGCTGATGTAACTCTTAGGGAAATGGGTCTGCAAAATGCCATTAACACAAGGGTTGGAGGATGGGGTTCTAAAGGACTCAGTGGGGGACAGAAGAGGAGACTAAGCATCTGCATTGAGATCTTAACACATCCAAGACTCTTGTTTCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCTTATTATGTCATGAGAAGAATTGCTAACCTTGTTCAGAAAGATGGCATTCAAAGGACTATTGTTGCATCTATTCATCAACCTAGCAGTGAAATTTTTGAACTCTTCCATCACCTTTGTCTTCTGTCTTCTGGTAAAACTGTATATTTTGGTCCTGCCTTTGATGCTAATCAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCAACACTCCATAACCCTTCTGATCATTACTTGAGGATCATAAACAAAGATTTTGAACAGGATGCTGAAGAAGGCTTTGGTAGTGGAATAACGGCAGAGGAAGCTATTAATATTCTTGTGAAGTCTTATAGCTTGTCTCAGATTAAAAACAAAGTCAATACAGAAGTGGCAAACATAAACCAAAGTGATTCTGGTGCAGTAGAGAAGAAGAGGGTCCATGCTGACTTCCTGACTCAGTGCCTTGTTCTTATAAGAAGATCTGCACTGAATTATTTCCGCGACTTGAGCAATTACTGGCTGCGCCTTGCTGTGTTTATTGCAATAGCTCTAAGCTTGGGCTCTATCTACTATGATATTGGCTTTGGTGTTGGATCTATTCAGGCTAGAGGATCTCTGCTTACTTTTTTCATTTCCCTTTTGTCTTTCATGACACTTGTTGGTGGATTTGCTCCAATGCTAGAGGAAATCAAGGTATTTGAAAGAGAGAGATTGAATGGACACTATGGAGTTACAGCATTTCTCACAGGGAACACATTTTCTGCTGTTCCATACATGCTAATAGTAACCATGGTTCCGGGACTAATATCCTATTACCTTTGTGGACTCCAGAAAGGACTATTCCACAATGGAGCAGAACACTTGATATACTTTGTATCAGTGCTATTTGCCATAGTTATGTGGGTTGAGAGCCTCATGCTTGTTGTAGGAAGTGTGTCCCCTAACTATGTTATAGGCATGTTCATTGCTGGTGGAGTCCAAGGAATCATGATCCTAGTTTGTGGATTCTATAGGTTACCAAATGATATTCCAAAACCCTTATGGAAATACCCTTTGTATTATCTGTCATTTCAAAAGTATGCACTCCAAGGGTATTTCAAGAATGAATTTGAAGGCTTAACATTTGTGATTGGTCATAACATGAACATTAGTGGTAGGGAAATACTAAGAGAGACATGGCATGTGGAAATGGGACACTCTAAGTGGCTTGATCTTGGAATCTTGTTTGTAATGATTCTTGTGTACAGAATGCTGTTCTTGGCAATCACTAAGAGCAAGGAGAAGTTGAAGCCTGTTTTTGCTGCTATTACTGCTAGACTTGAGTCACCAGCAATCATATAA 1917 0.4022 MNKLLDPSTESHIGITEGEGITVTWENLWVTVADGKKTKPILEGLTGYAQPGRLLAIMGPSGCGKSTLLDALSGRLSPNIKHKGNILINGHKQELAYGISGYVTQDDALLSTLTAQETLYYSAQLQFSDSMPISEKKERADVTLREMGLQNAINTRVGGWGSKGLSGGQKRRLSICIEILTHPRLLFLDEPTSGLDSAASYYVMRRIANLVQKDGIQRTIVASIHQPSSEIFELFHHLCLLSSGKTVYFGPAFDANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGFGSGITAEEAINILVKSYSLSQIKNKVNTEVANINQSDSGAVEKKRVHADFLTQCLVLIRRSALNYFRDLSNYWLRLAVFIAIALSLGSIYYDIGFGVGSIQARGSLLTFFISLLSFMTLVGGFAPMLEEIKVFERERLNGHYGVTAFLTGNTFSAVPYMLIVTMVPGLISYYLCGLQKGLFHNGAEHLIYFVSVLFAIVMWVESLMLVVGSVSPNYVIGMFIAGGVQGIMILVCGFYRLPNDIPKPLWKYPLYYLSFQKYALQGYFKNEFEGLTFVIGHNMNISGREILRETWHVEMGHSKWLDLGILFVMILVYRMLFLAITKSKEKLKPVFAAITARLESPAII 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04564 638 Pfam ABC-2 type transporter 344 562 IPR013525 GO:0016020|GO:0140359
Aip03g04564 638 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 23 268 IPR003439 GO:0005524
Aip03g04564 638 CDD ABCG_EPDR 20 250 - -
Aip03g04564 638 Pfam ABC-2 type transporter 225 292 IPR043926 GO:0140359
Aip03g04564 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 16 623 - -
Aip03g04564 638 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 16 623 - -
Aip03g04564 638 ProSitePatterns ABC transporters family signature. 165 179 IPR017871 GO:0005524
Aip03g04564 638 SMART AAA_5 51 244 IPR003593 -
Aip03g04564 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 257 IPR027417 -
Aip03g04564 638 Pfam ABC transporter 44 193 IPR003439 GO:0005524
Aip03g04564 638 Gene3D - 22 280 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04564 Aip-Chr3 129909863 129912474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04564 41 250 Calmodulin-binding Proteins AT2G36910 26.852 1.65e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04564 K05681 - gmx:100790102 949.118