Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04543 ATGGGTCGCGGCAAGTGCATGTTCGCACCTACGAAGATATGGTGCCGCAAGATCAATGTCAACCATAAGCGATACGCCGTCGTTTTCGCCATTGTTGCCTTAGTCATTCCCTTATTTGTTGTCGCACACAACTATCATATTGACATTGTGCCGAATCTTCCTCTCGTTATCTCAGATGTTGCTGAAGTCATTGAGAAGACAAAAGAAGCATCCAATGTCTGGAGATCCACACAATTCGTCTTGAAAAGGGAAAAATATGTAATCGCCGATACATTTCAGAAAAAGGGACCTCATGTTGTGTACGAATCGAAGGAGTTAAGGATGTTAAAGAGTTCTGGAACATTTTTGGTGTTGAGGTTGCAAATATTGAGAAAATCAATTTGTATGAAATTGGTGCTTGGTGGACACCTTAAAAGCTACCTCTCTCTCACACTTCTCCTTCAACGCTCTTCATTACATAGTCCTTTCCTTATTCTCTCAGTTGGCATATTTGGTGTGAGACGAAAGCAAGCATCCTTTGCTGAGATGGGCAATTTTCATTTGCTAATTGATTATCCTGGACTTTGTGTCAGTGGTTGA 579 0.4145 MGRGKCMFAPTKIWCRKINVNHKRYAVVFAIVALVIPLFVVAHNYHIDIVPNLPLVISDVAEVIEKTKEASNVWRSTQFVLKREKYVIADTFQKKGPHVVYESKELRMLKSSGTFLVLRLQILRKSICMKLVLGGHLKSYLSLTLLLQRSSLHSPFLILSVGIFGVRRKQASFAEMGNFHLLIDYPGLCVSG 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04543 192 Gene3D - 1 144 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aip03g04543 192 SUPERFAMILY Ribosomal protein L4 4 102 IPR023574 GO:0003735|GO:0005840|GO:0006412
Aip03g04543 192 PANTHER 60S RIBOSOMAL PROTEIN L4 1 140 IPR045240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04543 Aip-Chr3 129784733 129789507 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04543 1 144 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 34.545 2.21e-21 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04543 K02930 - aip:107633893 274.248