Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04530 ATGGAACGTTACGAGGTAATCAGAGATCTCGGTTCAGGGAACTTCGGTGTAGCAAAGCTTGTTAGAGAGAAATGCAGTGGTGACTTCTATGCTGTCAAGTTCATTGAGAGAGGCCTCAAGATTGATGAGCACGTGCAGAGGGAGATCATCAACCATAGGTCCTTAAAGCATCCCCATATCGTTAGGTTCAAAGAGTTGCTACTTACTCCAACACATCTTGCCATAGTGATGGAATATGCTGCTGGAGGAGAACTATTCGAGAGAATATGTAGTGCTGGAAGATTCAGCGAGGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGAGTCAGTTATTGCCATGCAATGGAAATTTGCCATAGAGATCTCAAGCTGGAAAACACACTTTTAGATGGAAGCACAGCACCAAGGCTTAAAATATGCGACTTTGGTTACTCAAAGTCTTCTGTTCTTCACTCGCAGCCAAAATCCACTGTAGGAACCCCTGCATATATTGCTCCAGAGGTCTTGTCAAGAAGAGAATATGATGGAAAGGTTGCAGATGTTTGGTCTTGTGGGGTGACCTTGTATGTGATGCTCGTTGGTGCTTATCCTTTTGAAGACCCAGACAACCCAAGAAACTTCAGAAAAACTCTTCAGCGAATTCTGAGTGTCCACTATTCTATTCCAGACTACGTTCGTATAAGCAAAGAGTGTAGACACCTTCTATCTCGAATATTTGTTGCCAACCCTGAAAAGAGAATTACCATACCAGAGATAAAGATGCTACCATGGTTCCAACAGAACCTACCACTAGAATTCACGGATGAGGGTGCAGGTAGGCTGCAAAATGTTGGTGGGAACCATGATGATGATAGTTCAATTCAGAACGTTGAAGAAATATTATCAATAGTACAAGAGGCTAGGAAGCCAAGTGAGGATAACCCAGAAGAAGCTGGTGGGCAGTTTGTTGGGGGCAGCATGGACCTTGATGATATTGATGTAGATGCTGACATGGATGATATTGAAACGAGCGATGATTTCGTCTGCACTTTGTGA 1041 0.4342 MERYEVIRDLGSGNFGVAKLVREKCSGDFYAVKFIERGLKIDEHVQREIINHRSLKHPHIVRFKELLLTPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHAMEICHRDLKLENTLLDGSTAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPDNPRNFRKTLQRILSVHYSIPDYVRISKECRHLLSRIFVANPEKRITIPEIKMLPWFQQNLPLEFTDEGAGRLQNVGGNHDDDSSIQNVEEILSIVQEARKPSEDNPEEAGGQFVGGSMDLDDIDVDADMDDIETSDDFVCTL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04530 346 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04530 346 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Aip03g04530 346 PANTHER SERINE/THREONINE KINASE 2 340 - -
Aip03g04530 346 MobiDBLite consensus disorder prediction 302 321 - -
Aip03g04530 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Aip03g04530 346 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04530 346 SUPERFAMILY Protein kinase-like (PK-like) 2 266 IPR011009 -
Aip03g04530 346 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 340 - -
Aip03g04530 346 CDD STKc_SnRK2 3 259 - -
Aip03g04530 346 Gene3D Transferase(Phosphotransferase) domain 1 80 267 - -
Aip03g04530 346 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Aip03g04530 346 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04530 Aip-Chr3 129700588 129703323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04530 3 294 CBL-interacting serine-threonine protein kinases AT5G25110 40.000 8.14e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip03g04530 Pkinase 3.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04530 K14498 - gmx:100807981 596.66