Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04525 ATGGACACAATAGCTGTCACCACATCAGTGGATTGCCAGAAACAAGTTCGATCATGGAGTCTGTTACGTTCTCTCATGCACCTAATAATCCCCACATGCACCACTTGCATCATACAAGATAAAGAAGAAGAAGAAGAAGATGAAACAGCACAAAAGAAGGAGTGCATAAAAAACCAGAAGCATTATTATTATTATTCCTCACCATCCAGCACCATCATCACTGCCACTATATTTGGATATAGCAATAATAAGGGTAAGGTTAGCTTGTGCATCGAGAGCAACTCGAATTCAAGAAACCCAATTCTGCTATTAGAACTAGCACTTCCGGCAAGCACGTTAGCGAAGGAGATGAGAAGGGGAAGGCTCAGAATCTTGCTAGAGAGCAAGGTGTCATCGTCATCATCACTATTTTCCACGCCTTTGTGGACAATGTATTGTAATGGAAAGAAGGTGGGGTATGCTGTGAAACGCAAGCCTTCGGAAACCGATCTTCAAGCTCTGCACATGATGGGTTCGGTTGGTGTAGGCACTGGTGTGTTGACAATGAAGGAGTTGATGAATAAAGATGAGAGTGTTAAAGAAGAAGAAGAAGAAGCAGCCAAAGTGACTTACCTTAAAGGTGAGTTTAGAAGGGTGCGTGGATCAAGGGACTGCGAATCTTTCCATTTGATTGATCCAGAAGGAGATGTAGATCAGGAGCTTAGTATTTTCTTTTTCAGGTCAAGATCCAAAATTTCGTACATGGTACCTGATTCCAACAACATAAACCAAGTTCTTGTACAGAATCCTCCTAGTACTACCACCCACCAATGTTCATTCCCAACTAAGCTTCTACTGTTACTGCGCCGCCTCATCCATTCAAAGGAAGCTGATGGGGGTTCACAAAGTAAGGAAGAAGAGAGAGTGTGCTCATGGTTATACACTTTGGCTCACTCTCAGAAATACATTGCCTTCGAGTATGTTGCTTCCACCGAAAGAGGTCTAAGTTTCACTGAAGCAGAGAGGAGGCTAAAGGAAAATGGGCCAAATGTTCCACTTGAGTATTCTTTTCCAAGGTGGTGGCATCTTTTGTGGAATTCTCTTTTCCATCCTTTTAACATGATCCTCATTGTTTTATCTGCAATGTCATTCATTGCTTGTGACGATGCAAATGGATGCATCATGCTTATACTGGTTTTCATTAGTGTTGCCCTTCGTTTCTGTCAGGAATACAGCAGCTCAAAAGCAGCCATGAAACTTTCTGAATTGGTAAGGTGCCCAGTAAAAGTGCAAAGATGCGCTGGTAGAGTTGTGCAGAGAGAGTTAATAGTTCAAGTTGATCACAGGGATATAGTTCCCGGCGACATTGTCATTTTTGAACCTGGTGATCTCTTTCCTGGTGATGTTAGGTTGTTATCTTCAAAGCATCTTGTTGTGAGCCAGGCCTCACTAACTGGGGAATCTTGGACAACTGAGAAAACTGCTGATATCAGAGAAGATCAAAGCACTCCTTTATTAGATTTAAAGAACATCTGCTTCATGGGCACGAGCGTGGTTTCAGGTACTGGAACAGGATTGGTTGTATCGACAGGATCCAATACTTATATGAGCACCATGTTTTCAAAAGTTGGGAAGAGGAAGCCACCAGATGACTTTGAAAAGGGTCTCAAGTGGATATTTTACTTGCTTATTTCAGTTATGCTAGTGCTAGTTACAATTATGTTCTTGACAGATTACCTTACATCACTTAATTTGAGCAACAGCATTCTTTTTGCAATCTCAGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATTGTGAATACATGTCTAGCGAAAGGAGCACTTGCTATGGCTAAAGACAAGTGTATAGTTAAAAGTTTGACCGCTATTCGCGAGATGGGATCCATGGATATTCTATGTATTGACAAGACAGGCACACTAACAATGAATCGTGCAATTATGGTTAATCATGTTGACAGCAAAGGGATGCCCCAAGAACAAGTTCTACGCTTTGCATTTCTCAATTCTTACTTCAAGATTGAGCAGAAGTATCCATTGGATGATGCAATTCTTGCATACGTATATACAAATGGACTTAAGTTTCAGCCATCCAAGTGGAGAAAGCTAGATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTGTCTGTAATCTTAGAAACAAATGAGAGACAGCCACAGTTCTCTGGCAGGTTCATGGTAACAAAAGGAGCATTGTTAGAAGTCATGAGAGTTTGTTCTTACATTGCGAATTCTGACAAAAAAGAAGGAATCTCGATCTTCTCTTCAGAAGACTATAAGAGAATCTTAAATCTTTCAGAAGAACTAAGCAATGAGGGATTAAGGGTTATAGCAGTAGCTATAAAGAAACTTGGAGAGGAAGCAAGTAATGGAATAAATACAAGTGAGGAGGGAGACATGATATTCCTTGGCCTAATAACATTTTTCGACCCACCAAAGGCGTCGGCGAAAGAAGCACTGCGGCGTTTGGCAGAAAAAGGAGTTGAAGCAAAGGTTTTAACAGGTGATTCACTGTCATTGGCAACAAGGGTATGCACTGAAGTTGGCATAAGAACCAGTGATGTGATAACAGGGCCAGAGATAGAGCAACTTGACCAAGAAAGTTTCCATGAGACGGTTCAACGCGCCACGGTGCTAGCACGCTTGACGCCAACTCAGAAACTGAGAGTGGTACAGTCGTTGCAGACAGTTGGAAAGCATGTGGTTGGATTCTTGGGAGATGGTGTGAATGACTCTCTTGCCCTTGATGCTGCGAATGTTAGCATTTCAGTGGACTCAGGTGTAGCCATAGCCAAAGACATGGCAGATATCATCTTACTTGAGAAGGATCTGAATGTGCTGGTTGCAGGAGTAGAGCACGGTAGACTCACCTTTGGCAACACAATGAAGTATGTGAAGATGTCAGTTATTGCAAACCTGGGAGGCGTGATTTCACTTCTCATAGCAATCTTGTTCCTCAAGTATGAGCCCTTAACCTCTAAACAGCTCCTCACACAGAACTTGCTCTACAGCGTGGGACAAATCGCCATCCCCTGGGACAAAATGGACGGAGAGTATGTCAAGAGTCCTCAGAAATGGTCAGAGAAAGGGTTGCCAATGTTCATATTGTGGAATGGGCCAGTATGCACTCTCTGTGACGTGGCAGCACTCTTGTTCCTTTGGTTCTATTACAATATCGGAGCTGATTTGGATGAGAAGTTCTTCCATTCAGCATGGTTCATTGAGGGCCTCCTCATGCAGACTCTCATCATTCACTTGATCAGAACTGACAAAATTCCTTTCATACAGGACATTGCTTCTTCGCCTGTCATGTGCTCCACACTTGTCATATCTGCAATTGGAATTGCACTTCCGTTCACACCTATTGGGAGAATAATGGAATTCACGCTTCTACCCTTCTCCTATTTCGGATTTTTGCTCATTCTTTTTCTTGGATACTTTGTACTTGGCCAGCTCGTTAAGAGACTTTACATATTGCTTTATAAGAGATGGCTTTGA 3522 0.4236 MDTIAVTTSVDCQKQVRSWSLLRSLMHLIIPTCTTCIIQDKEEEEEDETAQKKECIKNQKHYYYYSSPSSTIITATIFGYSNNKGKVSLCIESNSNSRNPILLLELALPASTLAKEMRRGRLRILLESKVSSSSSLFSTPLWTMYCNGKKVGYAVKRKPSETDLQALHMMGSVGVGTGVLTMKELMNKDESVKEEEEEAAKVTYLKGEFRRVRGSRDCESFHLIDPEGDVDQELSIFFFRSRSKISYMVPDSNNINQVLVQNPPSTTTHQCSFPTKLLLLLRRLIHSKEADGGSQSKEEERVCSWLYTLAHSQKYIAFEYVASTERGLSFTEAERRLKENGPNVPLEYSFPRWWHLLWNSLFHPFNMILIVLSAMSFIACDDANGCIMLILVFISVALRFCQEYSSSKAAMKLSELVRCPVKVQRCAGRVVQRELIVQVDHRDIVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESWTTEKTADIREDQSTPLLDLKNICFMGTSVVSGTGTGLVVSTGSNTYMSTMFSKVGKRKPPDDFEKGLKWIFYLLISVMLVLVTIMFLTDYLTSLNLSNSILFAISVASALNPQMLPLIVNTCLAKGALAMAKDKCIVKSLTAIREMGSMDILCIDKTGTLTMNRAIMVNHVDSKGMPQEQVLRFAFLNSYFKIEQKYPLDDAILAYVYTNGLKFQPSKWRKLDEIPFDFIRRRVSVILETNERQPQFSGRFMVTKGALLEVMRVCSYIANSDKKEGISIFSSEDYKRILNLSEELSNEGLRVIAVAIKKLGEEASNGINTSEEGDMIFLGLITFFDPPKASAKEALRRLAEKGVEAKVLTGDSLSLATRVCTEVGIRTSDVITGPEIEQLDQESFHETVQRATVLARLTPTQKLRVVQSLQTVGKHVVGFLGDGVNDSLALDAANVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYVKMSVIANLGGVISLLIAILFLKYEPLTSKQLLTQNLLYSVGQIAIPWDKMDGEYVKSPQKWSEKGLPMFILWNGPVCTLCDVAALLFLWFYYNIGADLDEKFFHSAWFIEGLLMQTLIIHLIRTDKIPFIQDIASSPVMCSTLVISAIGIALPFTPIGRIMEFTLLPFSYFGFLLILFLGYFVLGQLVKRLYILLYKRWL 1173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04525 1173 Pfam haloacid dehalogenase-like hydrolase 631 927 - -
Aip03g04525 1173 SFLD p-type atpase 617 963 IPR044492 -
Aip03g04525 1173 Gene3D - 647 817 IPR023299 GO:0000166
Aip03g04525 1173 Pfam Cation transporter/ATPase, N-terminus 321 376 IPR004014 -
Aip03g04525 1173 Gene3D - 419 523 - -
Aip03g04525 1173 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 287 1172 - -
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 1076 1097 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 971 986 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 669 682 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 1041 1057 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 548 564 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 1021 1034 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 989 1000 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 PRINTS Magnesium-transporting ATPase signature 1126 1147 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 Gene3D - 385 1123 - -
Aip03g04525 1173 SUPERFAMILY HAD-like 806 961 IPR036412 -
Aip03g04525 1173 SUPERFAMILY Calcium ATPase, transmembrane domain M 323 1170 IPR023298 -
Aip03g04525 1173 SUPERFAMILY Calcium ATPase, transduction domain A 429 534 IPR008250 -
Aip03g04525 1173 SFLD C1.7: P-type atpase like 617 963 - -
Aip03g04525 1173 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 304 1172 IPR006415 GO:0015444|GO:0015693|GO:0016021
Aip03g04525 1173 Pfam E1-E2 ATPase 429 614 - -
Aip03g04525 1173 SMART Cation_ATPase_N_a_2 310 381 IPR004014 -
Aip03g04525 1173 Pfam Protein of unknown function, DUF617 73 240 IPR006460 GO:0010274
Aip03g04525 1173 ProSitePatterns E1-E2 ATPases phosphorylation site. 637 643 IPR018303 -
Aip03g04525 1173 TIGRFAM A_thal_3588: uncharacterized plant-specific domain TIGR01570 73 241 IPR006460 GO:0010274
Aip03g04525 1173 PANTHER CATION TRANSPORTING ATPASE 287 1172 - -
Aip03g04525 1173 Coils Coil 38 58 - -
Aip03g04525 1173 Gene3D - 632 950 IPR023214 -
Aip03g04525 1173 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 388 683 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip03g04525 1173 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 880 993 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Aip03g04525 1173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 628 820 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04525 Aip-Chr3 129556150 129562248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04525 318 1172 Primary Pumps ATPases AT3G42640 25.568 1.26e-54 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04525 K01531 - gmx:100795153 1416.75