Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04519 ATGTCCAAACCTTGGGGCAATATCGGAAACTGGGCGGCGGAAGCTGAACGGGCCGAAGCGGAGGAGCGGGAGGCCGCCGCCGCTGCCGCCGCCAACCCGCAGGCCTTCCCAAGCCTCAAGGAGGCCGTTAACGCGAAGCCTAAGAAGAAGAAGATGACGCTATCGGAGTTCGCAGGCTACACTTCCGGTGGCGGTGGTGCGTTGGAGTCCAAACGCTTGACGCAGGACGAGATGCTCAGTCTCCCGACGGGGCCGAAGGAGCGGTCCGCAGACGAAATGCAGTACAACCGGCTCGGCGGCGGGTTCTCATCCTACGGTCGCTCCGGTGGGTCTTCGATGGGTCGCTCCAGGGACCGCGAAGGGAACGGCGAGGGTTCCTGGGGCGGAGGGAGGAGATCGTTCGGCGGATTGGAAGATGAGCGCAGGGGTCCGAGTCCTAGGGTTTCAGATATCGACCAACCTTCCAGGGCTGACGAGGTGGATAACTGGGCTTCGGGGAAGAAATTGCCGTCGTCTTTCGATTCCGGCCGGCAGAATAGATATAGTTCTCTTGGCAGCGGCGGAGGCGGTGGTGGCATTGGTGGCGGAGGCGGAGGTAGTGGATTTGGTGGTAGCTCTAGAGCTGACGAGGTAGATAATTGGACATTTGGAAAGAAGCCTGTTCCCGCCAGATCTTCAACTTTTGGTTCCGGTTTTCGCGATTCTGGCGGGGAGCAAGATCGCTGGACGAGGGGACCACCGCGGGGGGAGCAGTCGGATCGCTGGTCGAGGGGACCAGTGCGCGAGGAGCGGCCGAAGTTGGTGTTGGAACCACCGAGAGGCGATGCTTCTGCCAATGAAGTACCGGTGGTGAAAAGTAATAAGCCGAACCCTTTCGGTGCGGCGAGGCCGAGGGAGGAAGTTTTGGCAGAGAAGGGAGTGGATTGGAAGAAGCTGGAAACAGATTTGGATGCGAAGAAGTCTACTAGTCGGCCTTCGAGTGCACACTCCAGCAGGCCTTCCAGCGCCCAATCCAACCGCTCTGAAAGTGTCGGGCCTGCTGAAGCTGTGGCGAAGCCCAAACCCAAGGTGAATCCTTTTGGGGATGCCAAACCCAGGGAGCTTTTGCTGAGGGAGCGAGGTATTGATTGGCGGAAGGTTGATCTTGATTTGGAGCATCGCGCTGTTGACAGGCCTGAGACAGAGGAAGAAAAATTATTAAAAGAAGAAATTGATTGTTTGAGGAAGGAAGCTGAGAAAGAGTCTACCATGAATTCAAATAAAGAATCTTCAAATGAGACTGATGCAGAACAAAGCAGTACACAGGAAATATTATTGCAGAAAGAGAGGGAGCTTGAACATCTTATACGTGATTTGGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCATCGGCAGGAAGGTCTGTTGTTTATTCTGATAGGCCACATTCTCGATCAAGCTCAATCTCAATTGAGGATTCTAGAGGTGAGTCTGCAGACAGACCTCGATCCCGTGGCACAAGTGATACGTGGGCGGGTCCTAATGATGACCAAAGTCTCAAGACACAAGAGTTGGAGCAACAATCATTGAGTACTGGCACTGAAACTTTTGCCTTGTCTATTGTTACATCTTAA 1629 0.5439 MSKPWGNIGNWAAEAERAEAEEREAAAAAAANPQAFPSLKEAVNAKPKKKKMTLSEFAGYTSGGGGALESKRLTQDEMLSLPTGPKERSADEMQYNRLGGGFSSYGRSGGSSMGRSRDREGNGEGSWGGGRRSFGGLEDERRGPSPRVSDIDQPSRADEVDNWASGKKLPSSFDSGRQNRYSSLGSGGGGGGIGGGGGGSGFGGSSRADEVDNWTFGKKPVPARSSTFGSGFRDSGGEQDRWTRGPPRGEQSDRWSRGPVREERPKLVLEPPRGDASANEVPVVKSNKPNPFGAARPREEVLAEKGVDWKKLETDLDAKKSTSRPSSAHSSRPSSAQSNRSESVGPAEAVAKPKPKVNPFGDAKPRELLLRERGIDWRKVDLDLEHRAVDRPETEEEKLLKEEIDCLRKEAEKESTMNSNKESSNETDAEQSSTQEILLQKERELEHLIRDLDDKVRFGQKAVERPGSSAGRSVVYSDRPHSRSSSISIEDSRGESADRPRSRGTSDTWAGPNDDQSLKTQELEQQSLSTGTETFALSIVTS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04519 542 MobiDBLite consensus disorder prediction 456 542 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 237 270 - -
Aip03g04519 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 522 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 298 322 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 506 542 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 484 502 - -
Aip03g04519 542 Pfam Plant specific eukaryotic initiation factor 4B 1 516 IPR010433 GO:0003743
Aip03g04519 542 MobiDBLite consensus disorder prediction 1 365 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 168 185 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 420 436 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 323 344 - -
Aip03g04519 542 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 522 IPR010433 GO:0003743
Aip03g04519 542 MobiDBLite consensus disorder prediction 410 440 - -
Aip03g04519 542 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04519 Aip-Chr3 129469270 129472508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04519 1 516 Eukaryotic Initiation Factors Gene Family AT3G26400 55.866 1.09e-140 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04519 - - aip:107631697 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04519 03 129469270 129472508 Aip03g04519 03 129469270 129472508 ECH