Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04486 ATGGGTTTGTTTTCTCAAGCATTTGTACTTCATTTTCCCTTGTTAATCACCCTCCTCCTTCACAACCATGTGGTTGGTGTATCATCCACCACAGATAAACAAACCTTGATCACACTCAAGTCTCAGCTCAGTGATGACACTTCCAACAAACTATCTTCTTGGAACCAGAACACTTCCCCATGCAGCAACTGGACTGGTGTCAAGTGTAACAAACTAAGCCAAAGAGTAACTAGCCTTGATCTTTCAGGGTTAGGACTCTCAGGTCAATTGAGCTCTTCCATTGGCAACCTCATCCGTTTAAGAGTTCTCAACATGAGCTCTAACAATATTGAAGGAGTGATTCCTTCTAACATCACCCTCTTGACTCAGCTCCAGATTCTTGATTTATCATCAAACAAGATTGTGAGCAGCATTCCCACAGACATTGGAAGCTTGAGGAATCTTCAAGTCTTGAAGTTGGGAAAGAATAATCTGCATGGTGCAATTCCAGCTTCTCTGGGAAACATTTCTTCCCTCAGGAATATCAGTCTTGGCACCAATTATCTCAGTGGCTGGATTCCAAGTGACTTGGGAAGGCTCAAGAATCTGATAGAGCTTGATCTCACCATCAACAATCTCACAGGGACTGTTCCACCAGTTATATATAACATAACTTCCCTTGTTAACTTGGCCTTGGCTGCAAACTCCTTCTGGGGTGAGCTTCCTCAAGATGTTGGTCATACACTTCCAAATCTCTTGGTGTTCAACTTCTGCTTCAACAGATTCACCGGTGGAATTCCGGCTTCTCTGCACAACCTCACTAACATTAGGGTCATCCGAATGGCTCACAACCTCTTGGAAGGGACAGTGCCTCCTGGTCTAGGAAATTTGCCATTCCTGCGCATGTATAACATTGGATACAACAAGATAGTTAGCTCTCAAGGAAGAGGTTTGGATTACATTATTCATTCTTTGACAAACAGCACCAAACTGAACTTCCTTGCGATCGATGGTAACAGGTTGGAAGGTGTGATTCCTGAAGCCATTGGTAACCTCTCCAAGAATCTCTCAATATTATACATGGGAGGGAATAGAATCAATGGAAGCATACCCTCTTCCATTGGCCATCTTAGTGGCATGAGATTGTTGAACTTGAGCTACAATTTGATCACCGGAGAAATCCCACAAGAGTTAGGCCAATTAGAGGATCTACAAGAGCTGATTCTAGCTGGAAATCAGCTATCTGGTACCATTCCAAAGTCTCTTGGTAATCTCCTTAACTTAAACCAGATTGATCTTTCAAGAAATGAAGTTGTGGGTACAATACCAAGTAATTTTGGGAACTTTCAAAGCCTGCTCTTTATGGACTTATCCAGCAACAAACTCAGTGGAAGCATACCTGGGGAGATACTCAATCTCCAAACTTTGAGCAAGGTTTTAAATTTGTCAATGAACCTCTTGAGTGGACCAATACCTCAAGTTGGGAATTTGATTAGTGTTGCCACCATAGACTTTTCCATCAACAAATTGTATGGTGAGATTCCCAGCTCATTTAGCAATTGCCTGAGCTTGGAAAAACTGTCTCTGGCAAAGAATATGCTTTCAGGTCCCATTCCAAGTAGTCTTGGAGATGTGAAAGGTTTGGGAACTTTGGACCTGTCCTGCAACCAACTCTCAGGATCCATTCCTGGTGAACTTCAAAATCTACATGCCCTTCAGCTTTTAAACCTCTCTTATAATGATTTAGAGGGAGCCATTCCTAGTGGTGGAGTATTCCAGAATCTCTCTGCTGTCCATTTAGAAGGTAATACAAAACTCTGCTTGCATTTCTCATGTGTGCCTCATGGCCATGAAAGAAGGACCATCTACATCATCGTAGCCTTGGTGGTGACATTGATACTATGTCTCACAATTGGCTTGATACTATACATAAAGAACAGAAGAGTCAAGGTAACATCTGCGGCAGCATCTGAGCTGTTAAAGCTTCATGCTCCGATGATCTCTTATGATGAACTTCGTCAGGCAACTGACGAGTTCAGCCAGGAAAATTTAATAGGATCTGGGAGCTTTGGCTCAGTATATCGAGGCCTTCTACGCGAGGGAAGTATTGTTGCTGTGAAAGTGCTTAACATTCTAAGAACTGGTTCTCTGAAGAGTTTCTTTGCTGAGTGTGAGGCTATGAAGAACTCAAGGCACAGAAATCTGGTTAAGGTGATCACATCTTGCTCTAGTGTTGACTTCAAGAACAATGAGTTTCTGGCTTTGGTTTATGAGTACATGAGCAATGGGAGCTTAGATGACTGGATTAAAGGGAAGAGAAAGCATGCAAATGGAAATGGTTTGAAGCTTATGGAGAGACTGAATATAGCTATTGACACAGCTTGTGCATTGGATTACCTGCACAATGATAGTGAAATTCCGATTGTGCATTGTGATTTGAAGCCTAGCAACATTCTCTTGGATGATGACATGACTGCCAAGGTTGGAGACTTTGGATTGGCTAGGTTGCTGATTGAAAGATCAACAAATAATCAAGTCTCCATTAGCTCCACTCATGTCCTTAAGGGTTCAATTGGTTACATTCCACCAGAGTATGGATGGGGAGAGAAACCATCTTCAGCTGGAGATGTGTACAGTTTTGGGATAGTGTTACTTGAGCTGTTCTCTGGGAAGAGCCCGACAGATGAGTGCTTCGTGGATGGAATTCTTGGAGTTGGTTTGTCCTGTGCTGCAGACACCCCAGATGCGAGAATTGGCATTCGAGAAGCTCTTCGCCAACTAAAATCAGTTAGAGACTCTTTTTTGAAGAACAATGACAGTAAGAATGCTGCAGCTACTAGCAAACGTTACTACCAAGTTTCAACAGAATAA 2850 0.4253 MGLFSQAFVLHFPLLITLLLHNHVVGVSSTTDKQTLITLKSQLSDDTSNKLSSWNQNTSPCSNWTGVKCNKLSQRVTSLDLSGLGLSGQLSSSIGNLIRLRVLNMSSNNIEGVIPSNITLLTQLQILDLSSNKIVSSIPTDIGSLRNLQVLKLGKNNLHGAIPASLGNISSLRNISLGTNYLSGWIPSDLGRLKNLIELDLTINNLTGTVPPVIYNITSLVNLALAANSFWGELPQDVGHTLPNLLVFNFCFNRFTGGIPASLHNLTNIRVIRMAHNLLEGTVPPGLGNLPFLRMYNIGYNKIVSSQGRGLDYIIHSLTNSTKLNFLAIDGNRLEGVIPEAIGNLSKNLSILYMGGNRINGSIPSSIGHLSGMRLLNLSYNLITGEIPQELGQLEDLQELILAGNQLSGTIPKSLGNLLNLNQIDLSRNEVVGTIPSNFGNFQSLLFMDLSSNKLSGSIPGEILNLQTLSKVLNLSMNLLSGPIPQVGNLISVATIDFSINKLYGEIPSSFSNCLSLEKLSLAKNMLSGPIPSSLGDVKGLGTLDLSCNQLSGSIPGELQNLHALQLLNLSYNDLEGAIPSGGVFQNLSAVHLEGNTKLCLHFSCVPHGHERRTIYIIVALVVTLILCLTIGLILYIKNRRVKVTSAAASELLKLHAPMISYDELRQATDEFSQENLIGSGSFGSVYRGLLREGSIVAVKVLNILRTGSLKSFFAECEAMKNSRHRNLVKVITSCSSVDFKNNEFLALVYEYMSNGSLDDWIKGKRKHANGNGLKLMERLNIAIDTACALDYLHNDSEIPIVHCDLKPSNILLDDDMTAKVGDFGLARLLIERSTNNQVSISSTHVLKGSIGYIPPEYGWGEKPSSAGDVYSFGIVLLELFSGKSPTDECFVDGILGVGLSCAADTPDARIGIREALRQLKSVRDSFLKNNDSKNAAATSKRYYQVSTE 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04486 949 SUPERFAMILY L domain-like 30 304 - -
Aip03g04486 949 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 20 97 - -
Aip03g04486 949 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 96 893 - -
Aip03g04486 949 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Aip03g04486 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 801 813 IPR008271 GO:0004672|GO:0006468
Aip03g04486 949 PANTHER OS04G0122200 PROTEIN 20 97 - -
Aip03g04486 949 PANTHER OS04G0122200 PROTEIN 96 893 - -
Aip03g04486 949 SUPERFAMILY L domain-like 313 600 - -
Aip03g04486 949 SUPERFAMILY Protein kinase-like (PK-like) 654 920 IPR011009 -
Aip03g04486 949 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Aip03g04486 949 ProSiteProfiles Leucine-rich repeat profile. 123 145 IPR001611 GO:0005515
Aip03g04486 949 Gene3D Phosphorylase Kinase; domain 1 653 752 - -
Aip03g04486 949 SMART LRR_typ_2 97 120 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 266 290 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 121 145 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 193 217 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 562 587 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 418 441 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 442 466 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 538 561 IPR003591 -
Aip03g04486 949 SMART LRR_typ_2 370 394 IPR003591 -
Aip03g04486 949 Pfam Protein kinase domain 673 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04486 949 Gene3D Ribonuclease Inhibitor 311 605 IPR032675 -
Aip03g04486 949 Gene3D Transferase(Phosphotransferase) domain 1 753 946 - -
Aip03g04486 949 ProSiteProfiles Protein kinase domain profile. 672 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04486 949 SMART serkin_6 672 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04486 949 Pfam Leucine rich repeat 348 407 IPR001611 GO:0005515
Aip03g04486 949 Pfam Leucine rich repeat 516 575 IPR001611 GO:0005515
Aip03g04486 949 ProSitePatterns Protein kinases ATP-binding region signature. 678 700 IPR017441 GO:0005524
Aip03g04486 949 Gene3D Ribonuclease Inhibitor 190 310 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04486 Aip-Chr3 129130110 129133040 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04486 18 929 Receptor kinase-like Gene Family AT3G47570 41.858 0.0 684
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip03g04486 Pkinase 5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04486 - - gmx:100783512 1333.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04486 03 129130110 129133040 Aip03g04486 03 129130110 129133040 ECH