Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04470 ATGAAACCTGTTTTTGTGCTTCTCCTAATCTTTATTGTGTTTCCTACAAGGCCATTCTCAGCATCATCATCATCATCATCATCTCCCACCATTTCCCATGGTAGCAACAATTCTGTGTGCCCAGTGGGAATGGATTATGTGCTGACAGTCCCCTGGAACTCCTCTAGCTGCCATAACTTCCAACCTTTCCCATCCAAAAACAAAACACGTTCAAGTTTTTGTTGCACAGCTCTGTTATCCCTCTTTGGCATAGCACTTGCTCAAAACCTCAAAGAAAACTCTCTTTTCCAGTTCCCGAATCTTCCTACCTCAAAATCCTGCCTTCATCACTTCCAATCCAAGCTCAGTGCTCTCTCACTTCCAAACAACCTTGTTTCCTCTTGTTTTGACCCGCTTCAATTTGTTATCAGTCCCAACCTATGCGCTAACATCCAATCTAAGCAAGACTGGATCAACAATCTTGGTCCTACAACTCGGTTCAACGATGCCTGTAAGCCAGACCTCAGTGTCTCTGCCAACTGCGACATTTGTGTCACAGAAGGTCTAAATGTTCTGCAAAAGATGAATGTTATTGATGGAAATGCTTCTCATTCCCAAGACTGTTTTTATTTTTCAATTCTATATGCTGCTGGAATCGCAAACGAGCTTGGCCCTGAAAGCAGAGGTGCTATGTCTTGTATTTATGAGTTGCCACTTATTAATGATCAAGGGAGAGGTGCCAGAAGAAAGAGCCATAATCATGCTCTTGTATTTGGTTTAATTGGAGCTTCAATTGGAATCTTGGTTGTGTCTTCCTTGATAGGTTTGTGTCTATGCTACAACAGAGGTGGTTCTGGCTTAGTTTACAAGGGCATTCTACCTGATGGCACAATGGTTGCAGTTAAAAGGATAGAAGAATCGGATTCTCAAGGAGATGAAGAATTCTACAGGGAGGTGGACATTATTAGCAACTTGAAACACCGCAATCTAGTGCTGCTAAGAGGGTGTTGTGTGGCTGTTAAAGAAGAGGAAGAGGATTCTGGGTACAGAGAAAGCCAAAGATATCTTGTTTATGATTACATGCCAAATGGTAGCCTTGAAGACCATCTCTTCTCTTCCATGGACAACCGAAATATGAAGAAATCACTTACTTGGTCTCAAAGAAAGAGCATAATCTTGGATGTGGCAAATGGGTTGGTCTATTTGCACTTTGGAGTTAAACCTGCAATCTATCACAGAGATATCAAAACCACCAATATACTTCTTGATGCAGGTATGAATGCAAGAGTTGCTGATTTCGGGTTAGCTAAACAAAACTTTGAAAGTAGGTCTCTGATAAACACAAGAGTTGCTGGAACTCATGGGTACCTGGCACCAGAATATGCACTTTATGGCCAGTTATCTGAAAAGAGTGATGTCTATAGTTTTGGTGTGGTTATATTGGAAATATTGTGTGGAAGAAAAGCTCTTGATTTATCTTCATCCGGAACACCTGCATTCTTTATCTCAGATTGGGTTTGGTCATTGCTGAAATCTGGTAACTTAGAATCAGCTTTGGATGCTTCTATGTTAATAGATGAAAACCTTACTAGTAGGAAAATAATAGAAAGATTCTTAATGGTTGGTGTTCTGTCTTCTCATGTAGTAGCTGATTCAAGGCCAATAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAGATTCCACCAATTCCAGATAGGCCAATGGCTCTTGCACACCATGTGTTTCCCATAGTTATTTAG 1746 0.4072 MKPVFVLLLIFIVFPTRPFSASSSSSSSPTISHGSNNSVCPVGMDYVLTVPWNSSSCHNFQPFPSKNKTRSSFCCTALLSLFGIALAQNLKENSLFQFPNLPTSKSCLHHFQSKLSALSLPNNLVSSCFDPLQFVISPNLCANIQSKQDWINNLGPTTRFNDACKPDLSVSANCDICVTEGLNVLQKMNVIDGNASHSQDCFYFSILYAAGIANELGPESRGAMSCIYELPLINDQGRGARRKSHNHALVFGLIGASIGILVVSSLIGLCLCYNRGGSGLVYKGILPDGTMVAVKRIEESDSQGDEEFYREVDIISNLKHRNLVLLRGCCVAVKEEEEDSGYRESQRYLVYDYMPNGSLEDHLFSSMDNRNMKKSLTWSQRKSIILDVANGLVYLHFGVKPAIYHRDIKTTNILLDAGMNARVADFGLAKQNFESRSLINTRVAGTHGYLAPEYALYGQLSEKSDVYSFGVVILEILCGRKALDLSSSGTPAFFISDWVWSLLKSGNLESALDASMLIDENLTSRKIIERFLMVGVLSSHVVADSRPIILDALKMLEGDIEIPPIPDRPMALAHHVFPIVI 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04470 581 Gene3D Transferase(Phosphotransferase) domain 1 355 562 - -
Aip03g04470 581 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 275 568 - -
Aip03g04470 581 ProSiteProfiles Protein kinase domain profile. 267 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04470 581 Pfam Protein kinase domain 275 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04470 581 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 275 568 - -
Aip03g04470 581 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 274 - -
Aip03g04470 581 Gene3D Phosphorylase Kinase; domain 1 274 354 - -
Aip03g04470 581 Pfam SPARK 36 202 IPR043891 -
Aip03g04470 581 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 35 274 - -
Aip03g04470 581 SUPERFAMILY Protein kinase-like (PK-like) 274 521 IPR011009 -
Aip03g04470 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672|GO:0006468
Aip03g04470 581 SMART serkin_6 261 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04470 Aip-Chr3 129023364 129025195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04470 35 574 Receptor kinase-like Gene Family AT1G11050 52.623 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Aip03g04470 Pkinase 3.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04470 - - gmx:100788367 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00927 10 11177909 11180568 Aip03g04470 03 129023364 129025195 PCT