Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04432 ATGGAGTGCTATGGTGGGATGGGCAAGGCAAACGGTTTGTCTCCAGATGAAAGTGAAAATGAGTTAGGCCTTTCAAACAACGACGTTGTTGACGAGGATGACTTAAGAAAGGTTGAGTTGTTGTCGGATGAAGATGGTCGTGAATATGAAGACGTGAGTGGGTTGAGTGCAGAGGATATAATGAAAAAGGTGTTTCAAAGTGAAGAGCGTGCATATGAGTTTTATTATAGGGTAGGGAAATGCAATGGATTTGGGGTCTGTAAGGGAGACTATGAAAAGGATGAAGATGGGACTGTAGTGAGAAGGAGGTTCTTCTGTAATAGGGCTGGGCTAAGGGATGGAAAACACTACAACAGAGTAGACAGGAAGAGATGCCATAGGCCTGAGACACGCACGAATTGCCAGGCCCTGATGTCTGTATACCTTGATAAGGGAAGCTCGGTTTGGAAGGTTCGGAAAGTAATCTTCGAGCATAACCATGAATTGATACCAAGGGGAATGGTTCACATGCTCCGAAGTTTCCGGGCGATATCGGGTTCCGCAAAGGCCCACATGGATGAAATGCATGCGTATGGGTTGCCGACGTCTAAGATACTGGGGTACATGGCTGGGATTGCAGGTGGTTATTCTTGTTTGGGTTTTACCAAGAAAGACGCATACAACTATATTGATCGGTCAAAACGTACAAAGGTGGTTGATGGAGACATGAACGTTGCTATAGTCTACCTAGAAGGCAAGGCAGCTGCTGATCCCATGTCTATGGCCTGGTACAATTTGACTGAAGAAGGTATGTTGGCAAACATGTTTTGGGTAGATGGTCCTAGCGGGGTTGATTTTCAACATTTTGGAGACGTGGTTGTATTCGATTCAACGTATAAGAAGAACAAGTACAACAGACCCCTTGACATATTCTCAGGTTCAAACAACCACAAGCAAACAACGATTTTTGGTTTTGGTTTGGTTTTAGATGAGACAATCAGTTCATACAAGTGGATGCTGGAGAACTTGTTAGAAGTCATATGTGGGAAGATGCCCTCTGTTGTCGTGACCGACGGGGATGAATCAATGATAGCTGCAGTTAGGGAAGTGTTGCCCCGGCAACCCATAGGTTGTGTGCATGACATCTGCAGAAGAATGTGA 1140 0.45 MECYGGMGKANGLSPDESENELGLSNNDVVDEDDLRKVELLSDEDGREYEDVSGLSAEDIMKKVFQSEERAYEFYYRVGKCNGFGVCKGDYEKDEDGTVVRRRFFCNRAGLRDGKHYNRVDRKRCHRPETRTNCQALMSVYLDKGSSVWKVRKVIFEHNHELIPRGMVHMLRSFRAISGSAKAHMDEMHAYGLPTSKILGYMAGIAGGYSCLGFTKKDAYNYIDRSKRTKVVDGDMNVAIVYLEGKAAADPMSMAWYNLTEEGMLANMFWVDGPSGVDFQHFGDVVVFDSTYKKNKYNRPLDIFSGSNNHKQTTIFGFGLVLDETISSYKWMLENLLEVICGKMPSVVVTDGDESMIAAVREVLPRQPIGCVHDICRRM 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04432 379 Pfam MULE transposase domain 285 376 IPR018289 -
Aip03g04432 379 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Aip03g04432 379 PANTHER OS02G0262500 PROTEIN 58 367 - -
Aip03g04432 379 MobiDBLite consensus disorder prediction 1 28 - -
Aip03g04432 379 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 367 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04432 Aip-Chr3 128690344 128691483 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g04432 MULE 1.3e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04432 - - aip:107633916 785.023