Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04417 ATGGATATCGAGGAAGACATCCGTTCTTTGCAGCTTGACTCAGCAGAAGACAATAATGGGGTGGTAATTCCAGATGATGTAAAGCCAGAAGAAGTTGATAAATCTGAAAAGATTGAAGAAATTGAGAAATCTAATGAGATGGATGAAGTGAGAAATAGAGAAATTCCTCCTGTACAAGATCAACAAGATGAGCTTGACAACCAAAAAAGGCACTTGAATGTTGTATTCATTGGCCATGTTGATGCTGGTAAGTCAACAACCGGAGGCCAGATACTTTTCCTCAGTGGTCAGGTTGATGAAAGGACTATACAGAAATATGAGAAAGAAGCTAAAGATAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGAGTGAAGGGAAAAACAGTTGAAGTTGGAAGAGCTCATTTTGAGACAGAGTCAACACGGTTTACTATTTTGGATGCACCTGGTCACAAAAGCTATGTTCCTAACATGATTAGTGGTGCATCTCAAGCCGATGTTGGAGTGTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATACGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGACTAAGCTGCTTGTTGTTGTAAATAAAATGGATGATCCAACTGTGAATTGGGCAAAAGAAAGGTATGATGAGATTGAGTCAAAGATGATTCCATTTTTGAGACAATCAGGGTACAATGTGAAGAAAGATGTCATGTTTTTGCCAATATCTGGGCTGATTGGCACCAACTTGCAAACAAGAGTGGATAAAAGCATTTGCTCATGGTGGGATGGCCCTTGCTTATTTGAAGCGCTTGATGCTGTTGAAGTTCCTCTACGAGATCCCAATGGTCCTTTCAGGATGCCTATACTTGATAAATTCAAAGACATGGGAACTGTCGTTATGGGGAAAGTGGAATTTGGCAGTGTCCGAGAGGGAGATTCCTTGTTGGTCATGCCTAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATCGGGTTAGGCGTGCAGGACCCGGTGAAAATTTACGGATTAGGTTATCGGGTGTTGAAGAGGAGGATATATTATCTGGGTTTGTCCTGTCTAGTGTTGCAAATCCAGTACCAACTGTTATTGAGTTTGTTGCTCAGCTGCAAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTATTGCATATACACTCTGTTGTTGAAGAATGTGAAATTGTTGAGCTGTTACAGCAAATAGATCCAAAGACAAAGAAACCAATGAAAAAGAAAGTGCTATTTGTGAAGAATGGTGCTGTTGTTGTGTGCCGTGTTCAGGTTACTAACACGATATGTGTTGAGAAGTTTTCTGATTTTCCGCAACTAGGGAGATTCACTCTTCGCAGTGAAGGAAAAACTGTCGCGGTGGGAAAAGTCACTGAGGCAGATATTTATAGACACGCTGCTACCATGTACTTACTCGGAGGAACGAACTATCAGTGTCACTACCGTGTTAAATTTCGCAGAGAAAGAACGAGAACCAGAGCGACCCTTGATGACACTGAAAGAGAACAACTTTCCTCAACCCCACTTCTTGTTGAGGATGACAAACCCAGCAAGGAAGTAGAGGAAAGTGTGGAAGTGCTAAAAGATGCAGCTAAGACTAGAAAGGTAGCAGCAGAGAAGGTTCTGTCTGCACTTTCTGTCATTGAGAAAGCGAAAATTGATCCTTCTGGCTTTCTTGAAACCCTGGGTGGCAATGAATCTCCTGGGAGGACATGGATGCTAATTTTCACCGCTGAGAAACAATTGAAGGGGGGTCGATATTTTCCTCTCACAGCTGTTCAGAGGTTTGATGCTGCTATCAACCTAGGGAAAAAGGAAGACAGGGAACCAAGTACTAAGGATCCTTTCTTCATCTGGTTTTATATTGATGACGAAATAGCTGTTGCCCGTGGCCGAGGTGGAGGAACTGCATTTTGGTGTCGCTGTAAACGTGTGTACACTTGA 2049 0.4197 MDIEEDIRSLQLDSAEDNNGVVIPDDVKPEEVDKSEKIEEIEKSNEMDEVRNREIPPVQDQQDELDNQKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADVGVLVISARKGEFETGYERGGQTREHVQLAKTLGVTKLLVVVNKMDDPTVNWAKERYDEIESKMIPFLRQSGYNVKKDVMFLPISGLIGTNLQTRVDKSICSWWDGPCLFEALDAVEVPLRDPNGPFRMPILDKFKDMGTVVMGKVEFGSVREGDSLLVMPNKDQVKVVAVFIDENRVRRAGPGENLRIRLSGVEEEDILSGFVLSSVANPVPTVIEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTKKPMKKKVLFVKNGAVVVCRVQVTNTICVEKFSDFPQLGRFTLRSEGKTVAVGKVTEADIYRHAATMYLLGGTNYQCHYRVKFRRERTRTRATLDDTEREQLSSTPLLVEDDKPSKEVEESVEVLKDAAKTRKVAAEKVLSALSVIEKAKIDPSGFLETLGGNESPGRTWMLIFTAEKQLKGGRYFPLTAVQRFDAAINLGKKEDREPSTKDPFFIWFYIDDEIAVARGRGGGTAFWCRCKRVYT 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04417 682 CDD eRF3_C_III 387 493 - -
Aip03g04417 682 Gene3D - 51 293 IPR027417 -
Aip03g04417 682 PANTHER BNAA06G12300D PROTEIN 64 520 - -
Aip03g04417 682 PANTHER TRANSLATION FACTOR 64 520 - -
Aip03g04417 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 304 IPR027417 -
Aip03g04417 682 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 69 294 IPR000795 GO:0003924|GO:0005525
Aip03g04417 682 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 391 494 IPR009001 -
Aip03g04417 682 CDD EF1_alpha 73 293 - -
Aip03g04417 682 Gene3D Translation factors 388 495 - -
Aip03g04417 682 MobiDBLite consensus disorder prediction 1 36 - -
Aip03g04417 682 SUPERFAMILY Translation proteins 292 385 IPR009000 -
Aip03g04417 682 CDD eRF3_II 300 381 - -
Aip03g04417 682 PRINTS GTP-binding elongation factor signature 152 162 IPR000795 GO:0003924|GO:0005525
Aip03g04417 682 PRINTS GTP-binding elongation factor signature 168 179 IPR000795 GO:0003924|GO:0005525
Aip03g04417 682 PRINTS GTP-binding elongation factor signature 73 86 IPR000795 GO:0003924|GO:0005525
Aip03g04417 682 PRINTS GTP-binding elongation factor signature 212 221 IPR000795 GO:0003924|GO:0005525
Aip03g04417 682 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 125 140 IPR031157 -
Aip03g04417 682 Pfam Elongation factor Tu C-terminal domain 388 494 IPR004160 -
Aip03g04417 682 Pfam Elongation factor Tu GTP binding domain 69 274 IPR000795 GO:0003924|GO:0005525
Aip03g04417 682 Gene3D Translation factors 298 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04417 Aip-Chr3 128508487 128520110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04417 65 496 Eukaryotic Initiation Factors Gene Family AT5G60390 37.241 7.28e-94 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04417 K03267 - gmx:100784412 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g00171 10 1635774 1638196 Aip03g04417 03 128508487 128520110 PCT