Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04405 ATGAACAGGAACGAAAGACCACCTCTTACTTTTTCTTTGCTGTTTCAGTTTTTCCTATTAGCATTGCTCGGCATCACTGCAAACCAAGGGTTTTACTTGTTGGGATTATATTATGCTTCTCCAACTTTTGCTTCTGCAATGCAGAATTCAGTTCCTGCAATCACTTTTGTCATGGCCTCAGCTCTAGGACTTGAGGAAGTCAACATTGCAAGAATAGATGGATTGGCAAAAATTCTAGGAACCATTGCAAATGTTGGAGGTGCAACTGTGAACTGTGATCACTCTATACAAAGGCCCTCCTCTTCTCCACCTGCAGACACCTCAGATGCAAGAAGAAAGCTACATACATCAGTCATCAACCAAAGTTCAGAATTGGACATGGGGTTGCGTATACTTGCTTGGACATTGTTTGTCTTGGGCTGCTTGGATGGTTTTTCAGGCTCTTGTGGTGAAGAAGTATCCAGCAAAACTATCACACTTCCTTTACATTCTTCTTTGGATTAG 504 0.4187 MNRNERPPLTFSLLFQFFLLALLGITANQGFYLLGLYYASPTFASAMQNSVPAITFVMASALGLEEVNIARIDGLAKILGTIANVGGATVNCDHSIQRPSSSPPADTSDARRKLHTSVINQSSELDMGLRILAWTLFVLGCLDGFSGSCGEEVSSKTITLPLHSSLD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04405 167 PANTHER WAT1-RELATED PROTEIN 2 92 IPR030184 GO:0016021|GO:0022857
Aip03g04405 167 SUPERFAMILY Multidrug resistance efflux transporter EmrE 11 82 - -
Aip03g04405 167 Pfam EamA-like transporter family 13 79 IPR000620 GO:0016020|GO:0016021
Aip03g04405 167 PANTHER WAT1-RELATED PROTEIN 2 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04405 Aip-Chr3 128384157 128384978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04405 2 90 Nodulin-like Gene Family AT3G18200 73.034 8.36e-41 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04405 - - ahf:112735585 275.789