Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04381 atggatccatcaaatgttgccaatcaaacaggcagttatgctgatgcgtttgttaagcatcaacaacgatttggagacaaagtgcagaggtggaagcttgctctaactcaagttgcTGGATTATCTCCCCCTCGTTCAAAAATAAACAGTGCCAGTCCTGATTACATACTTGTTGAAGAAATTGTTCAACACATTTGGAGAAGATTGAAAAGCAATTACTCAACTGATTACCAAGGACTGGTTGGAATTCACAACCATATTGCACAAATCCACTCCTTGTTGCGTGTTGAGTTAGAAGCCGTTCGGATCATAGGAATATGCGGCATTGGAGGAATAGGTAAGACAACAATTGCTGGTGCATTGTATCATGAATTGTCATCCCAATTCAGTTTCAGCACTTTTGCTGTAAATGTTCAACAACAAATAGAAAACCATGGGATGCAGCACACACAAAGCAAATATATATCAGAGCTTCTAGAAGAAAAAATGCCTGCAGATTATTTGGGATTGAGAGTGTTAACAGAAAAGCTTAAAGTGGCCAAGGTTCTCCTCATTCTTGATGATATGAACAATTCAGCTCAAATAAGAGATTTCATTGGAGGACATGGTATCTTTGGCCTGGGAAGTAGGATCATTGTGACAAAGGAAGAATGGGAACGTGTATTGCAAAAGCTTGAAAAGATTCCCAATCTTAAAACCTATGACTTGTTGAAACTGagttatgatgggcttagtgaagaacagaaggatatgtttcttgacatagcttgcttctatagagagggacatgatgtgaatactgtaaaacaagcattcgatagctgcggtttcaatgctgccactggaatcagagttctcagtgatagaggcctcatatctatgttgagaggtgaactgatgatgcatgatctaatacgggaaatgggtcaagaaatagttcatcaacagtgtgctaatgaacctggaaaacgaagtcgattatggaagcatgaagacatttaccatgttataagagaaaacaagGGGACGGATGCTATCCGGTGTGTATTTCTTGACATGTGCAAAATCAAAGAAGTTCAACTACATCCTGAAACTTTCAAAATGATGCATAATCTGAGACTGCTCCAGTTCTACAAGTCTAGCTCAATTCAAGCCTTAAAAGTGAGCCTTCCTGCATTTCTTCATAGTCTCCCAGATAGTTTATGGTTTCTGTGTTGGAATGGCTTCCCTCAAAGATCTTTGCCACAGCACTTCTGCCCCAAAAATCTTGTTACACTCGACATGCGTGATAGTCAACTTGAACAACTTTGGGAAAAGGATCAGAAGTTACCAAATTTGAAAAGACTTGACCTCAGTGGTTCCAAGAACCTTGTTCAACTACCAGACCTTTCCCACTGCCCAAATATTGAAGAAATATTTCTCAGCCACTGCAAAAGCTTGGTTCGAGTTTACTCCTCAAGTTTCCTTAACAAGCTCAACTGCGTATGGCTAAACGGCTGCACTGAGCTTAGAAATCTAAATCTTCCAAGCAACATTCTGTCAAAATCTTCAGGCTTAATAGTTCTCAATGACTGTACCAACCTTGAGTTGTTTTCAATAAGCATCACCACAAAGGATGTTGTGTTACATGGTTGTTCCCGCAGTAGATCAATAGAGAGTCTCTTCAGAAACTGTTTGCCAGGGGATATGATTCGGTGTATGATGGGAACAAGAGGAGGGTCCTTATTTGAGAGCTTTTCTGACACTTTTGACCCCAATGGGGGTGCTGCTGCTAATTTAGATGATGAACCAATGGATAATATACACTTACTAAACTTGAAAGTGTTAAGAGAAGGTTCACCTTCATTATTTCCAAGTCTCTCAGAGCTTTGTTGGTTAGATCTCTCTTACTGTGAATCCCTCACATCCCTTCCAATTAACCTTTTTAAGCTGAAATGGCTAAGAAAACTATATCTTCGTGGCTGCTCAAATCTCGAGAAGCTCCCTGAGATAGAAGAGGATATGGAAAATTTAATGGTGCTCATCTTAGATGAATCAGGAATACAAGAATTACCTTCAACAATGCAAAATTTGGTAGGTCTTGAGGAGTTGAGCTTGCATCGTTGCAGAAGCCTTGTGTTCATTCCATCTTCAATTGGACGTCTCAGCAAACTCTGCATTCTTGATCTTACCTACTGTGAAGCACTTGAATCTCTTCCTAGCAGCATTTTCAACCTGAAGTTGACAAAGCTTGATTTGCATGGTTGCTCAATGCTGAAGACTTTACCAGAGATCATGGAACCTGCAGAATCTGTTGCTCACATGAACCTGGCAAAAACAGCAATTAAAGAAATACCCTCATCCTTGGCCTTTTTGGTTGGGCTTCAAACCTTGCAGCTCAACTTGTGCAAAGATCTTGAGTTTCTTCCAAACAGCATTGGTAATCTAAACCACCTCTCCAAGCTTGATTTTTCAGGCTGTGAGAAACTATCAGAACTTCCTAGGGACATTGGAAACTTGTCATCATTAAGGGAATTGTCGCTGCACGAAAGCAGCATTGTGGACCTTCCTGAGAGTATTGCTCATCTGTCAAGCTTGAAATCACTGGATTTAAGTGATTGCAAGAAGCTTGAAAATATCCCAGGCCTTCCACCATTTTTAGAACACTTTGTGGCGTTTGATTGCCCATCTGTTAGGAGAGTGTCAAGTTCAGGATTTGACATTAAACTTCCATCAGATTCCAAAGATGGTATTTTCAAGTTTCACCTTACCAATAGCCAAGAACTGACTCAAAGTTCTCAGAGTAATATTGCTGGTGATGCATGGCAAAGAATGCTAGATACAGCATATAGGTCTGTGTTGTTTTGCTTTCCAGGGAGTGCAGTTCCTCATTGGTTCCCTAATCGTTGCAAGGGACATTCAGTAACATTGAAGCAGAGTTCTCTAAATTGGTGCAGTGATAACAGGTTCATTGGTTTTGCTTTATGTGTGGTTTTTGGACTCGAAGCAATGATCAGCTAA 3000 0.3467 MDPSNVANQTGSYADAFVKHQQRFGDKVQRWKLALTQVAGLSPPRSKINSASPDYILVEEIVQHIWRRLKSNYSTDYQGLVGIHNHIAQIHSLLRVELEAVRIIGICGIGGIGKTTIAGALYHELSSQFSFSTFAVNVQQQIENHGMQHTQSKYISELLEEKMPADYLGLRVLTEKLKVAKVLLILDDMNNSAQIRDFIGGHGIFGLGSRIIVTKEEWERVLQKLEKIPNLKTYDLLKLSYDGLSEEQKDMFLDIACFYREGHDVNTVKQAFDSCGFNAATGIRVLSDRGLISMLRGELMMHDLIREMGQEIVHQQCANEPGKRSRLWKHEDIYHVIRENKGTDAIRCVFLDMCKIKEVQLHPETFKMMHNLRLLQFYKSSSIQALKVSLPAFLHSLPDSLWFLCWNGFPQRSLPQHFCPKNLVTLDMRDSQLEQLWEKDQKLPNLKRLDLSGSKNLVQLPDLSHCPNIEEIFLSHCKSLVRVYSSSFLNKLNCVWLNGCTELRNLNLPSNILSKSSGLIVLNDCTNLELFSISITTKDVVLHGCSRSRSIESLFRNCLPGDMIRCMMGTRGGSLFESFSDTFDPNGGAAANLDDEPMDNIHLLNLKVLREGSPSLFPSLSELCWLDLSYCESLTSLPINLFKLKWLRKLYLRGCSNLEKLPEIEEDMENLMVLILDESGIQELPSTMQNLVGLEELSLHRCRSLVFIPSSIGRLSKLCILDLTYCEALESLPSSIFNLKLTKLDLHGCSMLKTLPEIMEPAESVAHMNLAKTAIKEIPSSLAFLVGLQTLQLNLCKDLEFLPNSIGNLNHLSKLDFSGCEKLSELPRDIGNLSSLRELSLHESSIVDLPESIAHLSSLKSLDLSDCKKLENIPGLPPFLEHFVAFDCPSVRRVSSSGFDIKLPSDSKDGIFKFHLTNSQELTQSSQSNIAGDAWQRMLDTAYRSVLFCFPGSAVPHWFPNRCKGHSVTLKQSSLNWCSDNRFIGFALCVVFGLEAMIS 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04381 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 694 992 IPR044974 GO:0006952
Aip03g04381 999 Pfam NB-ARC domain 92 214 IPR002182 GO:0043531
Aip03g04381 999 SUPERFAMILY RNI-like 401 677 - -
Aip03g04381 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 215 533 IPR044974 GO:0006952
Aip03g04381 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 214 IPR044974 GO:0006952
Aip03g04381 999 PRINTS Disease resistance protein signature 176 190 - -
Aip03g04381 999 PRINTS Disease resistance protein signature 103 118 - -
Aip03g04381 999 PRINTS Disease resistance protein signature 854 870 - -
Aip03g04381 999 SUPERFAMILY L domain-like 611 891 - -
Aip03g04381 999 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 214 - -
Aip03g04381 999 Gene3D - 71 226 IPR027417 -
Aip03g04381 999 Pfam Leucine Rich Repeat 422 438 IPR011713 -
Aip03g04381 999 Gene3D - 1 70 IPR035897 -
Aip03g04381 999 SUPERFAMILY "Winged helix" DNA-binding domain 233 337 IPR036390 -
Aip03g04381 999 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 215 533 - -
Aip03g04381 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 255 IPR027417 -
Aip03g04381 999 Pfam TIR domain 2 83 IPR000157 GO:0007165
Aip03g04381 999 SMART LRR_typ_2 715 739 IPR003591 -
Aip03g04381 999 SMART LRR_typ_2 833 856 IPR003591 -
Aip03g04381 999 SMART LRR_typ_2 620 644 IPR003591 -
Aip03g04381 999 SMART LRR_typ_2 443 466 IPR003591 -
Aip03g04381 999 SMART LRR_typ_2 668 690 IPR003591 -
Aip03g04381 999 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 694 992 - -
Aip03g04381 999 Gene3D Ribonuclease Inhibitor 592 763 IPR032675 -
Aip03g04381 999 Gene3D Ribonuclease Inhibitor 764 923 IPR032675 -
Aip03g04381 999 Gene3D Ribonuclease Inhibitor 314 567 IPR032675 -
Aip03g04381 999 Pfam C-JID domain 950 995 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04381 Aip-Chr3 128190480 128194725 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04381 715 902 WRKY Transcription Factor Family AT4G12020 26.702 7.48e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04381 - - adu:107481402 1531.92