Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04378 ATGTTGGGCAGTTCTTCTTCTTCTCCTCCTCCTGCAATgaagtatgatgtgtttatcagcttcagaggggaggatacccgtgacggcttcaccagccatctctgcacagcactgcgcaagaggcacatcgaaacttacatggatgacaggcttgtgagaggggaagagatttcacccgcactggagaaagcaattgaagaatccaccatttatgtcattgttttctcccaaggctatgcttcttcccggtggtgtttggatgaactcaccaagatcatggattgcaagcacagattcaggagggaagtgattccagtgttctttatggtggacccggcacacgttaggcatcagataggaacttatggacaaccatttgagaagcaccaacagcgatacgaagacaaagtgcagggatggagatctgctctaaaccaagcagctaatctctccggatgggatTCACGAGCATTCAGACCTGAATCCATTCTTGTTAAAGAGATTGTGGAAGATATTTGGACAAAATTGAATAGTCAATCCATTAATGATAATGGAGGACTTGTTGGAATTGACAAGCATATTCAACAAGTTGAGTCCATCTTGCATGGTGATTCAGCAGATTTTCGGATCATAGGGATTTGGGGCATGAGAGGAATAGGTAAAACAACAATTGCCCATGCATTATATCGTAAGCTGGCAACCCAATTCAGTTACACAAGGTTGTTTGACGATGTCTCAAAAAAAATTGAAGAGTACAAAAATGATGGAGGATATAAGGACAGGAGGCACATGCTTCAAAGACTGaaggttctcctcattcttgataatgtgaacagcgcagatcaacttgaggatttgattggagggcgtcatagctttggtccgggaagtagaattattgtgactagtagtgacaaacaagtgctcaacaatgtaactgatgaaatatatgaggttaagaatatggattttcaggattctctacaactgttcagcttacatgcctttaaacaaaactacccaatagaatcctacatggaagtatcagaaaaggtactcaattatgctgaagggattccgttagctctcaaagttttgggctattttctttatggtagaacaagggaagcatgggaaagtgagttgcaaaagttggaaaaacttcctaatcctaaaatcttcgatgtgttgaaattaagttttgatgcgcttgatgaggagcaacaagatatatttcttgacatagcctgcttttATAGAGGGTATGAAGAGCATACTGCAAAACAAAAACTTAATGACTCTGGTTTCTCGGCTACCATTGGAATAGAAGTTCTCAAGGAGAGGTGCCTCATATCTGTTTTGAATCGGGAGATTGTGATGCATGACCTAATACAAGATATGGGACAAGAAATCATCCGTCGTCAAGGTGTCAACGATCCTGGAAAACGCAGTCGATTATTTAAGCATCAGGACATTTATCAAGTTTTAAAAAAGAACAAGGGGACAGATGCAATCCAATGTATCATGCTTGACATGTGCAAAATCAGAGAAGATTTACCAAATTTGAAAAGACTTGACCTCAGTGGTTCTCGGAAGCTGATTCAAATACCAGACCTCTCGCAGTCTCCAAATATTGAAGAAATTATTCTTAGTCATTGTGTAAAGTTGGATGTCGTTTACTCCTCTAGTTTCCTTGCCAAGCTCAGCTGCTTATGGTTGGATGGTTGTTATGAGCTTAGGATTTTAAATCTTCCAAGTAGTATCCTATTGAAATCTCTTGGTGTAGTAGTTCTTTATAACTGTCATAGCCTTGAGATGTTTTCAGTCAGTAAAACAAGTGAGGGAGTTCTACCATCTGGCTGTTCACGTGATGGAACACGCAGATGGAAGGAAGAGAAAAAGTGTGCACCAGATGCACCACAAAGGCATTATTTTGATATTTTTCATCCCATTGTTAGTGCTAAAGAATATGAAAACACTGGGGACAATATACACTTACTGAGGTTTAAAGTGTTGAGAGAAGGTTCGCCCTCGTCGTTCCCAGGTCTTAAAGAGATTTGTTGGTTAGATCTCTCTAATTGCGAATCCCTCACAATCCTTCCAGTTGAACTTTTCCAGATGAAATTTCTAAAAAGACTTGATCTCTGTGGCTGCTCAAGTTTGGAAAGTTTACCTGAAATAAACCAGACTATGGAAAATTTAACTGTTCTCATCTTAGACAAAACAGGAATACAAGAACTACCTTCATCCTTGCACCATTTGGTAGGGCTCGAAGAATTGAGCTTGCATGGGTGCCGAAGGCTTGAGTTTATTCCATCTTCCATTGGAAGTCTAAGTAGACTCTGCAAGCTGGACCTTACCTACTGTGAATTGCTTGAAACTATTCCAAGCAGCATTTTTAAGTTGAAGTTGTCAAAACTTGATTTACACGGTTGCTCAAGGCTGAGGATTTTGCCAGAGATCATGGAAGCTGCAAAAAGTATTGCACACCTTCGGTTAACAAAAGCTGCAGTAAAAGAATTGCCTTTGTCATTGGACCATTTGGTAGGCCTTACAACGTTGTGCTTATCATTGTGCAGTGATCTAGAGTTCCTTCCGAGCAACATTGTTAATCTAAGCCTTCTCTCTGATCTCGATTGTTCTGGTTGTGTCAATTTAACAAAAATCCCAAATAACATTGATCGTTTGTCATCACTAAGAGAATTGTCATTGCAGGGAAGTGGTATTGTGAACCTTCCTGAGAGTATTGCTCATCTTTCAAGCTTGAAATCATTGGATTTAAGTGATTGCAAAATGCTTGAATGCATCCCTGTGCTTCCACCATTTCTAAAACAGTTATTGGCATTTGATTGCCCATCTGTTAGGAAAGTGTCAAGTTCCAGGCTTAAACTCCCACCAGATTCCAAGGAGGGTCTCTTCAAATTTCATTTCACCAACAGCCAAGAATTGGATCCAAATGATCATAGTATTGCTGCTAATGCATGTGATATGATTAACCAGGATGCATATAGGTCTGTGCTCTTCTGCTTTCCAGGGAGTGAAGTTCCTCATTGGTTCCCTTATCGATGCAGGGGAAATTCAGTTACTCTGGATCCAGGTTCTCTGAATCCGATCAACGGTGATAGGCTCATTGGTTTCGCACTGTGTGTAGTTTTAGGAAGCTCTGAAGATCAGAGAAATAAGGATAGGGAATTTCTCTTCGGACTCAAATTTGAATATGAAGGCATGCATCTTCTTGCCAATAATGATCTTTTAAGGAACTATTTCTACTGGAAGGGTAAACGTATATTCAAGAATGTGGAATATGCCCTCTTTATTCCAAAGAGAAAGATAATGATTTTCCTGCTGGAGATTATTGGGTTCACTACAAGGTTTGCGCACCAGGTCACTGAATTATGCGATAGGCCGATAGACAAGTGCCATTTGAAAGGGTAA 3435 0.2967 MLGSSSSSPPPAMKYDVFISFRGEDTRDGFTSHLCTALRKRHIETYMDDRLVRGEEISPALEKAIEESTIYVIVFSQGYASSRWCLDELTKIMDCKHRFRREVIPVFFMVDPAHVRHQIGTYGQPFEKHQQRYEDKVQGWRSALNQAANLSGWDSRAFRPESILVKEIVEDIWTKLNSQSINDNGGLVGIDKHIQQVESILHGDSADFRIIGIWGMRGIGKTTIAHALYRKLATQFSYTRLFDDVSKKIEEYKNDGGYKDRRHMLQRLKVLLILDNVNSADQLEDLIGGRHSFGPGSRIIVTSSDKQVLNNVTDEIYEVKNMDFQDSLQLFSLHAFKQNYPIESYMEVSEKVLNYAEGIPLALKVLGYFLYGRTREAWESELQKLEKLPNPKIFDVLKLSFDALDEEQQDIFLDIACFYRGYEEHTAKQKLNDSGFSATIGIEVLKERCLISVLNREIVMHDLIQDMGQEIIRRQGVNDPGKRSRLFKHQDIYQVLKKNKGTDAIQCIMLDMCKIREDLPNLKRLDLSGSRKLIQIPDLSQSPNIEEIILSHCVKLDVVYSSSFLAKLSCLWLDGCYELRILNLPSSILLKSLGVVVLYNCHSLEMFSVSKTSEGVLPSGCSRDGTRRWKEEKKCAPDAPQRHYFDIFHPIVSAKEYENTGDNIHLLRFKVLREGSPSSFPGLKEICWLDLSNCESLTILPVELFQMKFLKRLDLCGCSSLESLPEINQTMENLTVLILDKTGIQELPSSLHHLVGLEELSLHGCRRLEFIPSSIGSLSRLCKLDLTYCELLETIPSSIFKLKLSKLDLHGCSRLRILPEIMEAAKSIAHLRLTKAAVKELPLSLDHLVGLTTLCLSLCSDLEFLPSNIVNLSLLSDLDCSGCVNLTKIPNNIDRLSSLRELSLQGSGIVNLPESIAHLSSLKSLDLSDCKMLECIPVLPPFLKQLLAFDCPSVRKVSSSRLKLPPDSKEGLFKFHFTNSQELDPNDHSIAANACDMINQDAYRSVLFCFPGSEVPHWFPYRCRGNSVTLDPGSLNPINGDRLIGFALCVVLGSSEDQRNKDREFLFGLKFEYEGMHLLANNDLLRNYFYWKGKRIFKNVEYALFIPKRKIMIFLLEIIGFTTRFAHQVTELCDRPIDKCHLKG 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04378 1144 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 678 771 IPR044974 GO:0006952
Aip03g04378 1144 Gene3D Ribonuclease Inhibitor 663 807 IPR032675 -
Aip03g04378 1144 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 678 771 - -
Aip03g04378 1144 SMART AAA_5 207 323 IPR003593 -
Aip03g04378 1144 Gene3D - 322 405 IPR042197 -
Aip03g04378 1144 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Aip03g04378 1144 PRINTS Disease resistance protein signature 356 370 - -
Aip03g04378 1144 PRINTS Disease resistance protein signature 917 933 - -
Aip03g04378 1144 PRINTS Disease resistance protein signature 210 225 - -
Aip03g04378 1144 SUPERFAMILY "Winged helix" DNA-binding domain 392 497 IPR036390 -
Aip03g04378 1144 SUPERFAMILY RNI-like 517 726 - -
Aip03g04378 1144 Gene3D Ribonuclease Inhibitor 496 616 IPR032675 -
Aip03g04378 1144 Gene3D Ribonuclease Inhibitor 808 984 IPR032675 -
Aip03g04378 1144 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 523 610 IPR044974 GO:0006952
Aip03g04378 1144 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 757 1059 IPR044974 GO:0006952
Aip03g04378 1144 SUPERFAMILY L domain-like 676 951 - -
Aip03g04378 1144 Gene3D - 11 178 IPR035897 -
Aip03g04378 1144 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 510 IPR044974 GO:0006952
Aip03g04378 1144 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 523 610 - -
Aip03g04378 1144 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 757 1059 - -
Aip03g04378 1144 Pfam NB-ARC domain 261 387 IPR002182 GO:0043531
Aip03g04378 1144 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 153 IPR035897 -
Aip03g04378 1144 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 510 - -
Aip03g04378 1144 Pfam C-JID domain 1010 1070 IPR045344 -
Aip03g04378 1144 Pfam TIR domain 14 188 IPR000157 GO:0007165
Aip03g04378 1144 SMART till_3 14 150 IPR000157 GO:0007165
Aip03g04378 1144 Gene3D - 179 321 IPR027417 -
Aip03g04378 1144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04378 Aip-Chr3 128174527 128178909 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04378 777 963 WRKY Transcription Factor Family AT4G12020 29.688 1.44e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04378 - - ccaj:109803335 1097.03