Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04371 ATGATGGGTTGGAACGATATAAGGACGCTGCGGAGAAGGTTGGGTGTCGCGGCTGTTTGGTGGCAGACGAAAGGAGACCCAGGAATGGAGAAGGTGGCCGCTGCCGCTCTGGGCTTTGGTGGAGAGGAGGAGCTGGCGCTGTGGTTTCTGGGCTCAGCAGAGGTGAGAAGAGGAGAAGAAGaagagaaagggacacgacggtgtgggttgttgtcggaggttgtggtgaagggaggtggctgtggcggtgttgagTCAAGGAACCTCATTCATTCTCTATTCGGAAAGCTGTGTTTCCAGGAGCTCGTACTCGAAGAAAGAAGACACCTGTGTTTCTGTGGAGAGGCAGTAACCGTCCGCCGTTTCTCAGCCGTTTCTGACCATGGTAGGAGGTATGTTACTTGTGGAAAGATACCAAAATGCAACTTTTTTGAGTGGATTGATGATTTTGATTGGATTGAGGTTGATGACGGTGCAAAGAATTGGTGGCCAAAGGAAAAGGAAAGGCGAGTTCACTGTTTTTGTGGGTCCAGGCGTACCGTTTTGGAAAGTGTAAAATCCGTTTTTAATAAATTATGTGACAGGATGGAGGCCAAAGAGCTGAGTTTGGAAGCTAATGAAAAATCAAAAGCCGTTACAAAAGTATCTGCTATGAAAGCTATCAAGAAGAGGATGGAGAAGGATATTGATGAAGTTGGAAAGATTGCACATGGTGTCAAAACAAAAGTAGAAGCTGTAAACAGAGATGTAATGAGACGAAGATAA 765 0.4131 MMGWNDIRTLRRRLGVAAVWWQTKGDPGMEKVAAAALGFGGEEELALWFLGSAEVRRGEEEEKGTRRCGLLSEVVVKGGGCGGVESRNLIHSLFGKLCFQELVLEERRHLCFCGEAVTVRRFSAVSDHGRRYVTCGKIPKCNFFEWIDDFDWIEVDDGAKNWWPKEKERRVHCFCGSRRTVLESVKSVFNKLCDRMEAKELSLEANEKSKAVTKVSAMKAIKKRMEKDIDEVGKIAHGVKTKVEAVNRDVMRRR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04371 254 Pfam Syntaxin 193 251 IPR006011 GO:0016020
Aip03g04371 254 PANTHER SYNTAXIN 203 250 IPR045242 -
Aip03g04371 254 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 203 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04371 Aip-Chr3 128110309 128115005 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04371 205 254 SNARE and Associated Proteins AT5G08080 56.000 3.54e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04371 K08486 - aip:110263658 101.679