Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04348 ATGGAGAGAGATTTCATGGGTCTAAGCTCAAAGGAGCCACTTGTGGTCAAAGAAGAGATCAACGATGATGGCTCCAAAGATTCTGGCTTCACCAAGGGCTCTACTGCTCAGTGGCTTTTCTCAAGCAAAGTCTCTGCTGTTCCACACTTGATGTCTTTTAAGGTTTCTCAAGATGAGAAGCCTTTTGACTCCACTCTAAAGTTCCCTGCTCCTGAACTTCAGAAATCTTTCAATCACAATGGACAAGGTGGCTTTCATTTTTCCATGACTCCGTATCCTGTACAACATGATGTGAATTCTGTGAATCGTCCTCACGATGTGAAGATGTTTTCAGTTTCCAATCAAGCAATTTCAGTTTCTGTGGGGAATCCATACCTGAAGAATCACTTTGCATCGGCTGCTCAGAATATAGGCAGTGCTAATGTGAAGCAGACATTACTTGGGGGAATACCAATTACACCAACCATCGGTGCTGTTGCTGAACGCAATGTGAAAACAGCTCCACCTTCTGCACAACTTACAATCTTCTATGCGGGTACTGTTAATGTCTTCCAAGATATCTCTGCTGAAAAGGCACAAGCTATTATGTTGTTGGCTGGCAATGAGTTGGCACAGCCCAAGGTTCAGGCAGCTGGTTCAAAGTTGGGAGCCGGTGATAGTGTGCCTGTCAATACACCACCTTGCTCCGGTGTTCCAAGTCCTTTATCCGTCTCATCACATTCCGGTGCGCAGTCAGGGAGTGGCTCCACTAGTACTGATGAATTTCTGACTGCTAAAACGACCGGGGCTCCCACCGGTTCTGTTAGTAAGGTGGAGCCTCCAAAAGTAGTCAGCGCAACCACTATGTTGACTTCAGCTGTGCCACAGGCTCGTAAAGCATCGTTGGCTCGTTTTCTAGAGAAGCGCAAGGAGAGGTTAGTATAG 924 0.4643 MERDFMGLSSKEPLVVKEEINDDGSKDSGFTKGSTAQWLFSSKVSAVPHLMSFKVSQDEKPFDSTLKFPAPELQKSFNHNGQGGFHFSMTPYPVQHDVNSVNRPHDVKMFSVSNQAISVSVGNPYLKNHFASAAQNIGSANVKQTLLGGIPITPTIGAVAERNVKTAPPSAQLTIFYAGTVNVFQDISAEKAQAIMLLAGNELAQPKVQAAGSKLGAGDSVPVNTPPCSGVPSPLSVSSHSGAQSGSGSTSTDEFLTAKTTGAPTGSVSKVEPPKVVSATTMLTSAVPQARKASLARFLEKRKERLV 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04348 307 Pfam Jas motif 288 307 IPR018467 -
Aip03g04348 307 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 306 IPR040390 -
Aip03g04348 307 MobiDBLite consensus disorder prediction 214 272 - -
Aip03g04348 307 MobiDBLite consensus disorder prediction 230 267 - -
Aip03g04348 307 SMART tify_2 166 201 IPR010399 -
Aip03g04348 307 ProSiteProfiles Tify domain profile. 166 201 IPR010399 -
Aip03g04348 307 PANTHER PROTEIN TIFY 7 12 306 - -
Aip03g04348 307 Pfam tify domain 168 200 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04348 Aip-Chr3 127916337 127919226 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04348 1 305 Tify Gene Family AT1G70700 34.628 2.95e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip03g04348 tify 3.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04348 K13464 - gmx:100807043 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04348 03 127916337 127919226 Aip03g04348 03 127916337 127919226 ECH