Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04302 ATGGCTACTTTGTTCTCAGTGTGTTCGGGTTCATCTGCTTTTCTGTCTCCATGCACTTCACACACCAGGTGCTTGTCTCTTTTACCCAAAGGATCACCACTTCTTCACCACATCAAGAAACCTTTTTCTGTGAAATCCCTTTCTTCTTTGGAAACTCAAGAAGTATCATCAGTATCAGTGTCACCAGCAGTTACCACCTTCTGGCAATGGCTTAAGGAAGAAGGTGTTATCTCTTCAAAGACACCAGTGAAACCTGGTGTGGTCCCTGAAGGCCTTGGACTTGTTGCAACCAAAGACATATCAAGAAACGAGGTTGTTCTTCAGGTTCCAAAGAGGTTTTGGATTAACCCAGATGCAGTTGCTGCTTCTGAGATTGGGAATGTGTGTAGTGGTCTCAAGCCATGGCTTTCTGTTGCTTTGTTCCTCATTAGGGAGAGGTCAAGGGATGATTCACTTTGGAAGCACTACTTCCCTGTTCTGCCAAAAGAAACTGATTCTACTATATACTGGTGGGTTTCTTTTGTTTTGTTTTGTACTCAACTTCTGAACACAACATTGGGTGTGAAAGAGTATGTGCAGAATGAAATTATGAGACTGCAAGAAGAAATCATACTCCCTAACAAGAAGCTTTTTCCTTTTCCTATAACACTGGATGACTTCTTCTGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTAGACTTCGCAATGAAAATTTGGTTGTTATTCCACTAGCAGACTTGATAAACCACAGTGCAAGAGTAACTACAGAAGATCATGCTTATGAAGTTAAAGGAGCTGCAGGCCTTTTCTCTTGGGATTACTTATTTTCCCTAAGAAGCCCCCTTTCTGTCAAGGCTGGGGAACAGATATATATCCAATATGATTTGAACAAAAGCAACGCCGAGTTGGCTCTGGACTATGGCTTCATCGAACCAAATTCTGACCGTAATGCATATACCTTGACACTTGGAATACCCGAGTCCGACCCTTTCTATGATGACAAACTAGACATTGCAGAGACCAATGGTTTTGGTGAGACAGCATACTTTGACATATTCTACAACCAACCACTTCCACCAGGGATGATTCCATACCTGAGACTTGTAGCTCTAGGAGGTACTGATGCTTTCCTACTGGAAGCGCTATTCAGAAACACTGTCTGGAGTCATCTAGAATTGCCAGTGAGCCGTGACAATGAGGAACTTTTATGCAGGGTTGTTAGAGAGGCCTGCAAATCTGCTCTTGCTGGTTATCATACAACCATTGAAGAGGATAACAAGTTAAAGGAAGCAAAATTAGATTCAAGACTTGCAATAGCAGTCGGAATAAGAGAAGGGGAGAAGAAAGTTCTGCAACAAATTGATGAGGTCTTCAAGGAGAAAGAATCGGAACTGGACCAGTTAGAGTATTACCAAGAAAGGAGGCTCAAGGACCTTGGCCTCTGCGGCGAAAGTGGTGATATACTAGGGGACCTTGAGAAGTTCATGTAA 1494 0.4264 MATLFSVCSGSSAFLSPCTSHTRCLSLLPKGSPLLHHIKKPFSVKSLSSLETQEVSSVSVSPAVTTFWQWLKEEGVISSKTPVKPGVVPEGLGLVATKDISRNEVVLQVPKRFWINPDAVAASEIGNVCSGLKPWLSVALFLIRERSRDDSLWKHYFPVLPKETDSTIYWWVSFVLFCTQLLNTTLGVKEYVQNEIMRLQEEIILPNKKLFPFPITLDDFFWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEVKGAAGLFSWDYLFSLRSPLSVKAGEQIYIQYDLNKSNAELALDYGFIEPNSDRNAYTLTLGIPESDPFYDDKLDIAETNGFGETAYFDIFYNQPLPPGMIPYLRLVALGGTDAFLLEALFRNTVWSHLELPVSRDNEELLCRVVREACKSALAGYHTTIEEDNKLKEAKLDSRLAIAVGIREGEKKVLQQIDEVFKEKESELDQLEYYQERRLKDLGLCGESGDILGDLEKFM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04302 497 Gene3D - 312 476 IPR036464 -
Aip03g04302 497 Pfam SET domain 91 295 IPR001214 GO:0005515
Aip03g04302 497 ProSiteProfiles SET domain profile. 74 296 IPR001214 GO:0005515
Aip03g04302 497 PIRSF RMT_SET 1 496 IPR011192 GO:0009507|GO:0030785
Aip03g04302 497 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 44 489 - -
Aip03g04302 497 Gene3D set domain protein methyltransferase, domain 1 60 311 - -
Aip03g04302 497 SMART set_7 79 302 IPR001214 GO:0005515
Aip03g04302 497 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 44 489 - -
Aip03g04302 497 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 319 490 IPR036464 -
Aip03g04302 497 SUPERFAMILY SET domain 61 317 IPR046341 -
Aip03g04302 497 CDD SET_RBCMT 75 311 IPR044431 GO:0016279|GO:0018022
Aip03g04302 497 Pfam Rubisco LSMT substrate-binding 327 452 IPR015353 -
Aip03g04302 497 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 37 495 IPR011192 GO:0009507|GO:0030785
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04302 58 251 NAC Transcription Factor Family AT3G56570 24.257 6.37e-06 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aip03g04302 SET 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04302 K00592 - gmx:100818113 798.119