Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04295 ATGGAAGGAAGTAGTAAAAGTTGTGAACTACTACCACCAGGGTTTAGATTCCACCCAACAGATGAGGAGCTAATTGTGTATTACCTTTGTAACCAAGCAACATCAAAGCCCTGCCCTGCTTCCATCATCCCTGAAGTTGACATCTACAAATTTGATCCATGGGAATTGCCAGGGAAGGCTGAGTTTGGGGAGAAAGAATGGTACTTCTTTAGCCCAAGGGAAAGGAAGTATCCCAATGGGGTTCGGCCTAACCGCGCAACAGTTTCTGGGTATTGGAAGGCCACAGGGACAGACAAGGCTATTTACAGCAAGTGTAAGCATGTTGGTGTCAAGAAGGCCTTGGTTTTCTACAGGGGTAGACCTCCAAAGGGGATCAAGACTGATTGGATCATGCACGAATATCGTCTTCTTCAACAATCTAATCACAACAGCAGGATCACTGGTTCTATGAGACTGGATGACTGCGTCTTGTGTAGGATATATAAGAAAAAACATGCTGCTAAAGCATTGGATCAAGGACAGGAATACCCAACAACAGTTCAAATTAATCTAAATGCATCAACCAACAATGATGATGAGAAGGAGTTGATGATGATGAAGAATCTTCCAAGGACTTGTTCCCTTACTTATCTTTTGGACATGAATTACTTTGGTCCAATCTCACAGCTATTGTCTGATGGATCCTACAACAACTCATCAACCTTTGAAATATTTCAACATAGCAATAGTGTTGACAACATTGGAATAGTGGATCCTCTTGTCAAAACTCAAATGGTTGAAATGGATGATAGCTATTATGCTCAAGATTCAGGCAAGTCCCAAGTGATGAAGCAAGGGAATGATTTAAGAGGATATTACTAA 861 0.4146 MEGSSKSCELLPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPGKAEFGEKEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSKCKHVGVKKALVFYRGRPPKGIKTDWIMHEYRLLQQSNHNSRITGSMRLDDCVLCRIYKKKHAAKALDQGQEYPTTVQINLNASTNNDDEKELMMMKNLPRTCSLTYLLDMNYFGPISQLLSDGSYNNSSTFEIFQHSNSVDNIGIVDPLVKTQMVEMDDSYYAQDSGKSQVMKQGNDLRGYY 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04295 286 Pfam No apical meristem (NAM) protein 12 136 IPR003441 GO:0003677|GO:0006355
Aip03g04295 286 ProSiteProfiles NAC domain profile. 11 163 IPR003441 GO:0003677|GO:0006355
Aip03g04295 286 Gene3D NAC domain 20 168 IPR036093 GO:0003677|GO:0006355
Aip03g04295 286 SUPERFAMILY NAC domain 9 163 IPR036093 GO:0003677|GO:0006355
Aip03g04295 286 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 6 261 - -
Aip03g04295 286 PANTHER NAC TRANSCRIPTION FACTOR 56 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04295 Aip-Chr3 127375755 127376994 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04295 1 243 NAC Transcription Factor Family AT1G69490 62.550 4.13e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g04295 NAM 3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04295 - - adu:107489303 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04295 03 127375755 127376994 Aip03g04295 03 127375755 127376994 ECH