Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04285 ATGGCTTCAACAAAGTTGCCTTCAGGTGCAAGCAAGAAGTTCAAGCCTACAGATGAAGAACTCATTCAAGATTTTCTTCTTAACAAAATCAATGGGAGGCCTCTACCAAACAATGGAACCATTCTTGAAGGTGAATTGTTTGGTACGGAGAAGAATCCATGGGAAATTTGGGAAGAAAACGTTGAAAATTCTTATGACGGGAAGGACCTCTATTTTTTCACTACTCTGAAAAGGAAGTTCTCAACTAACAGCTTGCGGATGGTTCGCACCATTGGGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAATAAAACTAACCAGCGCATAATTACAGCTTATTTTCTGAATGCCAATGATTATGCTGGGAAAGTAGAATTTGTTAACCAATCAGAGAATGGAGATGAAAGGATGGAGATTCAAAATGAATCACCAAACCAATCAGACAAAGCAAACCAATCAGAGAATAATGGAGATGAGAAGATTGATGAGATTCAGAGAGAACTAACAAATCAATTAGAGAATAATGAGGATGAAATACAGGTTGAGGCTTTTGATACTACTATTGGAATTGAGGCAAACTGTGAGGAAAAGGGAGATGATGATGATGAAGATGACAATGATATGACATGGCCAGAGTATTTTGCAATGCAATTGTTAGAACTTAACAAAGACTGGTTCATCCCAAAGGATGATGTCCCCATTATTCCAAATAAATTTCACAATGACATGTTAAAGCGGTTTAAAAAGGTTTTATGA 771 0.3761 MASTKLPSGASKKFKPTDEELIQDFLLNKINGRPLPNNGTILEGELFGTEKNPWEIWEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEGEDIGKEIMANKTNQRIITAYFLNANDYAGKVEFVNQSENGDERMEIQNESPNQSDKANQSENNGDEKIDEIQRELTNQLENNEDEIQVEAFDTTIGIEANCEEKGDDDDEDDNDMTWPEYFAMQLLELNKDWFIPKDDVPIIPNKFHNDMLKRFKKVL 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04285 256 MobiDBLite consensus disorder prediction 139 164 - -
Aip03g04285 256 Coils Coil 249 256 - -
Aip03g04285 256 Pfam No apical meristem (NAM) protein 13 109 IPR003441 GO:0003677|GO:0006355
Aip03g04285 256 Coils Coil 166 186 - -
Aip03g04285 256 ProSiteProfiles NAC domain profile. 8 172 IPR003441 GO:0003677|GO:0006355
Aip03g04285 256 SUPERFAMILY NAC domain 12 110 IPR036093 GO:0003677|GO:0006355
Aip03g04285 256 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 111 - -
Aip03g04285 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 111 - -
Aip03g04285 256 MobiDBLite consensus disorder prediction 190 212 - -
Aip03g04285 256 Gene3D NAC domain 17 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04285 Aip-Chr3 127207084 127208289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04285 2 110 NAC Transcription Factor Family AT5G63790 35.780 4.68e-09 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g04285 NAM 4.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04285 - - aip:107627432 384.8