Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04278 ATGGCTTTGAAGAACATGCATTCCTCTTTTCTTACCCTCTTTGTTGTAATGCTTTCTTTCTTTCCCTCTTTATCCATGGCTAAACATTATTATTACAACAATGTTCCACCAGCAACATTTTGTGACACCACAGAAGACCCTGCTTATTGCAAAACCCTGCTTGCAAACCAATACGGCAACGGTTATGACTACGGTCGAATTTGCGTCCAAAAATCAGTGTCACAATCACACAGCTTCTTGAATTTAATGGAGTCATATCTCCAGGATGGATCATCGTACGATCAAAACACGATTCGAGCCCTCCAAGATTGTAGATTTCTCGCTGAACTAAACTTGGATTTCTTGTACAACACACAAGAGACGGTTAATAAATCCAGCAATGTTCTTCAATCTTCACATGCTGAAGACATTGTGACACAGCTCAGTGCTACTTTGACGAACCAACAAACATGTCTGGATGGTCTTCAAACCACAGCTTCCGATGAAAGAGTGAAGAGTTATCTATCTTCAATGCTCTCTAATGATACCAAGCTCCATAGCATGTCCTTGTGTTTGTTCATGAGGGGTTGGGCTCCTGAGAAGAAAATCAAACATTCATGGAAACAAAATGGTCGTTTACCGTATAAGATGCCGAAACGAGTACGTGACATGTATGATTCGGGTAGAGGCCACCATGGAAACCACGGCCGCCACCACCACCTGAGGAAACTGCTTCAGACGGAAAGCGTAAATGTAAGGGACATGGTGGTTGTTAGCAAGGACGGAAGCGGAAACTTCACCACTATCAACGCAGCCATAGCTGCGGCGCCAAATAACACGGCTTCCAGTGATGGCTACTTCCTTGTTTTCATCAAGAAAGGTGTGTATGAAGAGTATGTGTCTATTGCGAAGAACAAGAAGCACTTGATGCTAGTTGGAGATGGAATCAATCGGACAATTATCACCGGCGATCGCAATGTTGTCGATGGCTCTACAACGTTCAACTCAGCAACTTTTGCTGTGGTGGGACAAGGTTTTGTAGCAGTGAACATAACATTCCAAAACACAGCAGGGCCAAGCAAGCACCAAGCAGTTGCCCTTAGAAGCGGAGCTGACTTATCAGCCTTTTACATGTGCAGCTTCGAGGGCTACCAAGACACACTCTACGCCCATTCCATGCGTCAATTCTACAGCGACTGCCACATTTATGGCACCGTTGATTTTATTTTCGGTAACGCCGCCGTAGTCTTCCAAAATTGCAACATCTTCCCCCGCCTCCCTATGACCGGCCAGTTCAACTCAATTACCGCCCAAGGCAGAACCGATCCCAACCAAAATACCGGAATCTCCATACACAACGCAACGATTCGACCCGCTGACGATTTGGCCCCTCGCGTTGGTGTTGTGAAAACGTACCTTGGTAGGCCTTGGAAGCAATACTCGAGGACGGTTTTCATGGAATCCTTTATGGATGGTTTTGTTGATCCTGCTGGCTGGCATGATTGGAGTGGAAGTTTTGCGCTGAATACTTTGTATTACGCGGAGCATAAGAATGCGGGAACTGGTTCAAGCACTGCAAGTCGAGTTTCGTGGCCTGGTTATCATGTTATTGGGGAAATGGATGCGGCTAATTTCACTGTGTCTAATTTCTTGCAGGGGGATAGCTGGTTGCCTCAAACGGGTGTTCCATTCTTGAATGGGTTAATATAA 1689 0.4553 MALKNMHSSFLTLFVVMLSFFPSLSMAKHYYYNNVPPATFCDTTEDPAYCKTLLANQYGNGYDYGRICVQKSVSQSHSFLNLMESYLQDGSSYDQNTIRALQDCRFLAELNLDFLYNTQETVNKSSNVLQSSHAEDIVTQLSATLTNQQTCLDGLQTTASDERVKSYLSSMLSNDTKLHSMSLCLFMRGWAPEKKIKHSWKQNGRLPYKMPKRVRDMYDSGRGHHGNHGRHHHLRKLLQTESVNVRDMVVVSKDGSGNFTTINAAIAAAPNNTASSDGYFLVFIKKGVYEEYVSIAKNKKHLMLVGDGINRTIITGDRNVVDGSTTFNSATFAVVGQGFVAVNITFQNTAGPSKHQAVALRSGADLSAFYMCSFEGYQDTLYAHSMRQFYSDCHIYGTVDFIFGNAAVVFQNCNIFPRLPMTGQFNSITAQGRTDPNQNTGISIHNATIRPADDLAPRVGVVKTYLGRPWKQYSRTVFMESFMDGFVDPAGWHDWSGSFALNTLYYAEHKNAGTGSSTASRVSWPGYHVIGEMDAANFTVSNFLQGDSWLPQTGVPFLNGLI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04278 562 Pfam Plant invertase/pectin methylesterase inhibitor 39 183 IPR006501 GO:0004857
Aip03g04278 562 PANTHER PECTINESTERASE 31 559 - -
Aip03g04278 562 SUPERFAMILY Pectin lyase-like 247 559 IPR011050 -
Aip03g04278 562 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 31 559 - -
Aip03g04278 562 CDD PMEI-like_3 39 191 - -
Aip03g04278 562 Gene3D - 246 562 IPR012334 -
Aip03g04278 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 188 IPR035513 -
Aip03g04278 562 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Aip03g04278 562 Pfam Pectinesterase 249 547 IPR000070 GO:0030599|GO:0042545
Aip03g04278 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 186 IPR035513 -
Aip03g04278 562 SMART PMEI_2 32 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04278 Aip-Chr3 127096275 127099205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04278 13 562 Carbohydrate Esterase AT1G02810 53.726 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04278 K01051 - gmx:100813051 748.043