Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04276 ATGGAAGGTGAGAAGCTTGATGAGATCATGTTACCAGGTTTCAGGTTCCACCCAACTGATGAGGAGCTTGTGGGGTTCTACCTTAAGAGAAAGATTCAGCAAATGCCTCTGTCCATTGAGCTCATCAAGCAACTTGATATCTATAAATATGATCCTTGGGATCTTCCAAAAGTGGCAGGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGGAACAGTGCAAGGCCAAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCCACAGGGACTGACAGGCCTATATACTCCTCAGAGGGTTCAAAGTGCATTGGACTCAAGAAATCTTTGGTCTTCTACAAAGGCAGAGCTGCCAAAGGTGTTAAAACTGATTGGATGATGCATGAGTTTAGGCTCCCTTCTCTTGCTGACTCTTCATCCGACAAGACCACTATTCCTCCTAATGACTCTTGGGCAATCTGCAGAATATTCAAGAAAACAAATGCTACAGCTCAAAGAGCACTCTCTCACTCTTGGGTTTCTACCTTACCTGAAACACCAACCACCACTACCAATGATACAGATCACATATTCCACTTTTGTTCATCCAACATGCCAACAATGATGGCAAAGAAAACTAGCTTCATGACCCAGTTTTGCACTAACTACACTAGTGACACACAAATCCAAGATGTTGCATCATCTTATAAACCACCCTTCATTAATATTAATCCATTGCTTTACAAACACTTTGATCATCATCATCATCAGTTACCACCCATTATTTCAAATGGAGATCTTATAAGCAACGACTGTTTAATACCCTCTTCTACTACTACTCCACTTGAAACATCCTCTAATAGTGCAAAACCTACTATGGATTTTTCTTCATTGTTGCTGAACATGTCATCTTCTGTTCTTGGAGATTTTGCTGGAAAGACATCATCGTCGTCCTCATCCCAAGAGGGTACAGCAGCAACAGCAACAACAATCACAAGTAGCTTCGGTGGTGGAATGCAGGAGCACTACCCAACAATACCATTACTGCGTCAGATGCATCAAGGGAACAACAACAACAACATTGGCATCAACAACAACAACGTGTCTGCTGGCGGTGAAGAACAAGAGTTGGAGAAAGTTGGATCCATTGTTGGGTTCCCATTCATGAACATTGGGGATGCATGGAAGTCAAATATGCTTTGGGATACTTCTTGTCCCTTGTGA 1218 0.4236 MEGEKLDEIMLPGFRFHPTDEELVGFYLKRKIQQMPLSIELIKQLDIYKYDPWDLPKVAGTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLADSSSDKTTIPPNDSWAICRIFKKTNATAQRALSHSWVSTLPETPTTTTNDTDHIFHFCSSNMPTMMAKKTSFMTQFCTNYTSDTQIQDVASSYKPPFININPLLYKHFDHHHHQLPPIISNGDLISNDCLIPSSTTTPLETSSNSAKPTMDFSSLLLNMSSSVLGDFAGKTSSSSSSQEGTAATATTITSSFGGGMQEHYPTIPLLRQMHQGNNNNNIGINNNNVSAGGEEQELEKVGSIVGFPFMNIGDAWKSNMLWDTSCPL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04276 405 MobiDBLite consensus disorder prediction 309 336 - -
Aip03g04276 405 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Aip03g04276 405 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 2 403 - -
Aip03g04276 405 PANTHER PROTEIN FEZ ISOFORM X1 2 403 - -
Aip03g04276 405 Gene3D NAC domain 19 169 IPR036093 GO:0003677|GO:0006355
Aip03g04276 405 SUPERFAMILY NAC domain 10 164 IPR036093 GO:0003677|GO:0006355
Aip03g04276 405 ProSiteProfiles NAC domain profile. 10 164 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04276 Aip-Chr3 127078101 127079754 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04276 4 203 NAC Transcription Factor Family AT1G26870 74.038 1.98e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip03g04276 NAM 6.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04276 - - gmx:100815365 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04276 03 127078101 127079754 Aip03g04276 03 127078101 127079754 ECH