Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04241 ATGGCCTACTCAAACTCACCAATGGTGAGTCCCTGCAAGAAGGACATGCTGTGTATTCATCCCCTGTGGTTTTCAAGAACAGCTCCAACAACGTACTTTGGTGTCTTCGATAAGAATAGCGTGGGTAACAGCAGCAACCATGTTTTCGGCGTGGAGCTTGATACTTCTATGAGCGCGGAGTTTGAGGATATCAACGACAACCATGTTGGGATTGATATCAATGACTTGAAGTCAGCAGCATCGGCAGTTGCAGGATATCATAACGATGATGGTATTTTCAATGCTTTGAGACTTGCTAGTGGCAACCCTATGCAGGTATGGGTGGAATATGATGGGATGAATAAACACATTAATGTTACTTTGGCACCAATCAACATTGATAAACCAAAACAAGCTTTGCTATCGTTGACCAAAGACCTTTCTCCAATTCTTGAAGAGAATATGTATGTTGGCTTCTCTTCCTCCACGGGTATGGGTACTGCTTCGCAATACATTCTGGGTTGGAGTTTTGAGATCAATGGCCAGTCTCAGCCACTTGAACTATCTCAACTCCCAAAGTTGCCTAGGAAAGGTGATAATAAACATAAAGGGTATAAGAAGGTGGTCTTGGCAGTTGCATTGCCTATGATATCACTCATGTTGGTTCTCTTGGTGACTTTAACAGTTAATCATGTCATCAAAAGGAAGAAGTTTTCTGAGCAACTTGAAGACTGGGAGCAAGAATGTGGTCCTAGTAGATTCAGGTATAAAGATCTCTACTTGGCTACAAAGGGGTTCAGGGAGAAGGAGCTATTAGGAAGGGGCGGATTTGGTAAGGTCTACAAAGGTGTGATAGTGATAGCAGCTTCCAAAGCTGAGATTGCAGTAAAGAGGGTATCCCATGAGTCCAAACAAGGTGTAAGGGAATTTGTGGCAGAAGTTGTGAGCATTGGCCGTCTTCGCCATAGGAATCTGGTTCCCCTTCGAGGATATTGCAGGCGCAAAGGAGAGTTGCTTTTGGTCTATGACTACATGCCAAATGGGAGTTTAGACAAGTATCTCTTTAACAAACCAAAACTGACCCTTAATTGGAGCCAGAGATTTAGAATCATCAAAGGAGTTGCTTCGGCTTTGCTCTATTTGCATGAAGGATGGGAGCAAGTTGTGGTCCATAGAGACATAAAGGCCAGCAATGTGCTACTGGATGCAGAAATGAATGGTAGATTAGGGGACTTTGGTCTTGCAAGGTTGCATGACCATGGAAGCAATCCTCAAACTACTCATGTTGCCGGAACTTTCGGGTATATGGCCCCTGAGCATATCAGAACAGGTAAGGCCACTACAATATCTGATGTATTCGGTTTTGGTGCATTTCTACTTGAGGTTGCTTGCGGAAGAAGGCCCACGGAGAAAACAGAGGAATGGCTTGACAATGCAAATCTTGCTGATTGGGTGTATGATTGCTGGAAGAAAGGTGGGATTCTTGAGGCAAAGGATCAAAATTTGAGCACAGATTCAGAGACAGAGGAGGTGGAATTGGTGCTGAAACTTGGTTTGTTTTGCTCCCAGTCAGAGCCTACGGCTAGGCCGAGCATGCACCAAGTTATGCATTACTTAGAAAGGGAAGTTCCTTTGCCACATTTATCTTTGCTTAGCTTACCTTCCACATTCAGACACCATACTCAAGACTTGCCGAATCCGGCTTCCCCGGATAGGCTGTTGCTCCAGACTTCAGTTGTTGAATCAATTCTCTCAGGTGGTCGATGA 1746 0.4439 MAYSNSPMVSPCKKDMLCIHPLWFSRTAPTTYFGVFDKNSVGNSSNHVFGVELDTSMSAEFEDINDNHVGIDINDLKSAASAVAGYHNDDGIFNALRLASGNPMQVWVEYDGMNKHINVTLAPINIDKPKQALLSLTKDLSPILEENMYVGFSSSTGMGTASQYILGWSFEINGQSQPLELSQLPKLPRKGDNKHKGYKKVVLAVALPMISLMLVLLVTLTVNHVIKRKKFSEQLEDWEQECGPSRFRYKDLYLATKGFREKELLGRGGFGKVYKGVIVIAASKAEIAVKRVSHESKQGVREFVAEVVSIGRLRHRNLVPLRGYCRRKGELLLVYDYMPNGSLDKYLFNKPKLTLNWSQRFRIIKGVASALLYLHEGWEQVVVHRDIKASNVLLDAEMNGRLGDFGLARLHDHGSNPQTTHVAGTFGYMAPEHIRTGKATTISDVFGFGAFLLEVACGRRPTEKTEEWLDNANLADWVYDCWKKGGILEAKDQNLSTDSETEEVELVLKLGLFCSQSEPTARPSMHQVMHYLEREVPLPHLSLLSLPSTFRHHTQDLPNPASPDRLLLQTSVVESILSGGR 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04241 581 PANTHER - 29 554 - -
Aip03g04241 581 Pfam Legume lectin domain 25 185 IPR001220 GO:0030246
Aip03g04241 581 CDD STKc_IRAK 265 534 - -
Aip03g04241 581 ProSitePatterns Protein kinases ATP-binding region signature. 265 290 IPR017441 GO:0005524
Aip03g04241 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Aip03g04241 581 SUPERFAMILY Protein kinase-like (PK-like) 234 533 IPR011009 -
Aip03g04241 581 Gene3D Phosphorylase Kinase; domain 1 219 337 - -
Aip03g04241 581 Gene3D - 17 184 - -
Aip03g04241 581 Pfam Protein tyrosine and serine/threonine kinase 262 532 IPR001245 GO:0004672|GO:0006468
Aip03g04241 581 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 29 554 - -
Aip03g04241 581 SUPERFAMILY Concanavalin A-like lectins/glucanases 46 277 IPR013320 -
Aip03g04241 581 Gene3D Transferase(Phosphotransferase) domain 1 338 537 - -
Aip03g04241 581 CDD lectin_legume_LecRK_Arcelin_ConA 32 174 IPR001220 GO:0030246
Aip03g04241 581 SMART serkin_6 259 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04241 581 ProSiteProfiles Protein kinase domain profile. 259 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04241 Aip-Chr3 126630587 126632931 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04241 29 546 Receptor kinase-like Gene Family AT2G37710 61.657 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Aip03g04241 PK_Tyr_Ser-Thr 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04241 - - adu:107484540 743.036