Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04238 ATGATGGGAAGACAAAGTGCTAGAAAGTGGATTAGAAACTTAATTCTGGGCAAGAAATCATCATCGAAGTCTAATTCATCAAAACCTCAAGATGTTTTTAAACCTTCAAGTAACAAGGATATGGTGATGGTGGTGGTGTCTTCTGAGGCATCAATGTCTCCTCATCCAGCCCCTCCAAGTTCTTCAGCTAAAGCCATAACAAAAGGAATGGTACCAGAAAATGAGGTAGTTAATGGATCATCAAATGAAAAGCTTTTTGTTATTGCAAGTGAAGATGAACAGGCCAATGCACAAGCACAAGATGCTGTTGCTAATATTGGATCTGAGGATCATGCTGAGAAAATCAACCTTACAGAGGCAGCTATAATAGCTCAAGCAGCTCTTAGAGGCTATCAGGCACGCAGAAAGTTTGAGATACTGAAAGGGATGATACCCCTTCAAGCTCTTATTCGTGGCAAGTTGGCTCGAAGAGAAGCTGTTTCTGCTCTATACTGTGTTAAGGGAATAGTTAAAGTTCAAGCACTCGCTCGTGGTTATAAAGTTAGGCACTCTGCTATTGGTCTTCAAGTGCAGAAAACTCTTAAGGATACTAAATGTTCAAATTCTATTGGGAGAGTTACATCAACAAAGGCAGAGAAGATTTCAGATAGTGTCTTTGTTCACAAGCTTCTGGCATCGTCGCCGGCGGCTGTGCTTTCCAGACAACTCAGATATGAATGGCTTGAACGTTGGACGAGATCACGATTTTGGGCACCTCTTCAAGAATTGAAGAAAATTTATGAGAAAAATGTTTTAGGCCAAACAGTAGAAGCTGGTGAGGGAAAAGCCAAAAGAAATGCAAGGAAAGGAGAAGCTGTGAGGGTTGACAAGAAAAAGGAATCAAGCATGGCATTGCATTCATCAGTTAAGGAAAATGAGAAAAGAAAACAACACATGACAAGAATTGAGGATACTAATAATAGTAGTTTCCAGAGAAGAGCTTCACTTCCTGCTAATTATTATTTGAAGAATGATAAGAATAAGAATGAGTCATCACAAAACACTACTACTACTACTACTACTACTACTACTACTCCAAGAGTTCCAAGTTATATGGCTCCTACTGAGTCTGCAAAAGCTAAGCTAAACTCTCCAAGATTTGGTAGTGATTTGGTATTAGACAGAAATGGTATAAGCAGGAGGCTGTCACTTTCATTTTCACTTAATGGCAAGTTAGGAATGGCAAAGATAGATAACAGATCCCTCTCATCTTCAAGGGATTGGACAGTTTCAGATAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1305 0.3969 MMGRQSARKWIRNLILGKKSSSKSNSSKPQDVFKPSSNKDMVMVVVSSEASMSPHPAPPSSSAKAITKGMVPENEVVNGSSNEKLFVIASEDEQANAQAQDAVANIGSEDHAEKINLTEAAIIAQAALRGYQARRKFEILKGMIPLQALIRGKLARREAVSALYCVKGIVKVQALARGYKVRHSAIGLQVQKTLKDTKCSNSIGRVTSTKAEKISDSVFVHKLLASSPAAVLSRQLRYEWLERWTRSRFWAPLQELKKIYEKNVLGQTVEAGEGKAKRNARKGEAVRVDKKKESSMALHSSVKENEKRKQHMTRIEDTNNSSFQRRASLPANYYLKNDKNKNESSQNTTTTTTTTTTTPRVPSYMAPTESAKAKLNSPRFGSDLVLDRNGISRRLSLSFSLNGKLGMAKIDNRSLSSSRDWTVSDKLIQPQWRR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04238 434 ProSiteProfiles IQ motif profile. 167 193 IPR000048 GO:0005515
Aip03g04238 434 MobiDBLite consensus disorder prediction 274 315 - -
Aip03g04238 434 Pfam Protein of unknown function (DUF4005) 343 404 IPR025064 -
Aip03g04238 434 Gene3D - 116 164 - -
Aip03g04238 434 MobiDBLite consensus disorder prediction 335 364 - -
Aip03g04238 434 MobiDBLite consensus disorder prediction 17 34 - -
Aip03g04238 434 Pfam IQ calmodulin-binding motif 167 183 IPR000048 GO:0005515
Aip03g04238 434 Pfam IQ calmodulin-binding motif 118 137 IPR000048 GO:0005515
Aip03g04238 434 PANTHER IQ-DOMAIN 5-RELATED 351 406 - -
Aip03g04238 434 PANTHER IQ-DOMAIN 5-RELATED 2 313 - -
Aip03g04238 434 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Aip03g04238 434 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Aip03g04238 434 MobiDBLite consensus disorder prediction 16 39 - -
Aip03g04238 434 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 2 313 - -
Aip03g04238 434 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 351 406 - -
Aip03g04238 434 SMART iq_5 116 138 IPR000048 GO:0005515
Aip03g04238 434 SMART iq_5 139 160 IPR000048 GO:0005515
Aip03g04238 434 SMART iq_5 164 186 IPR000048 GO:0005515
Aip03g04238 434 MobiDBLite consensus disorder prediction 272 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04238 Aip-Chr3 126611569 126614265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04238 112 308 IQD Protein Family AT1G18840 43.519 1.17e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04238 - - aip:107634789 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04238 03 126611569 126614265 Aip03g04238 03 126611569 126614265 ECH
Aip03g04238 03 126611569 126614265 Aip01g02074 01 111930140 111937735 ECH