Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04211 ATGTCCAAGACTGAAGAGAAAGTTTCTGAGCTCATTACAGAGTTTACTAATGAAGGCAAGATAATGTTACTTGGTGTTGATGACATGAATATCTTTAAGGGAATAAGTTTGAAGCTATTGGCAATGGAGCAGCTCCTGATTCAGCACCCTGAGTGGCAAGGAAAGGTTGTGTTGGTTCAGATAGCCAATCCTGCAAGGGGAAGAGGGAAGGATGCGAAGGAAGTGCAGGCTGAGTCCAAGGCGACCGCAAAACGAATAAACGAAACCTTTGGGAAGCCAGGTATGATCCTGTTATTCTTATTGAAGAGCCACTGA 315 0.4413 MSKTEEKVSELITEFTNEGKIMLLGVDDMNIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDAKEVQAESKATAKRINETFGKPGMILLFLLKSH 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04211 104 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 2 97 - -
Aip03g04211 104 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 95 - -
Aip03g04211 104 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 2 97 IPR001830 GO:0003824|GO:0005992
Aip03g04211 104 Pfam Glycosyltransferase family 20 3 96 IPR001830 GO:0003824|GO:0005992
Aip03g04211 104 Gene3D Glycogen Phosphorylase B; 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04211 Aip-Chr3 126233591 126233905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04211 1 94 Trehalose Biosynthesis Gene Families AT1G68020 74.468 1.16e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04211 K16055 - twl:119984288 157.147