Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04207 ATGGAGCATGCACCTGATAATGGAGGCAGCAATGGCGGTTTTAACAGTGGCACAAGAGAAGTGCGACCACCGGATCTTGAAGTGGATGATAAAATGGAAGAAAGAGTATTCTTTGATGAGATGATAGAAGAGTCAGATGATACAGAGGAATTTCAAGGAATGTATCAAGATGAAATTGAGCAGGAAGCTGTGAATTCTGAGGATTTAGGGGAGCAAGAATTTCAAGCAATGTTTGATGGGAATGATTTTTCACATGAGGTGGATGAATTATATCGAATAGAAGATATTGAAAATATTGCCATGGTTGATTTTCTGAACATAGGTGCTCATGAGATGGAATGTTTTCATTTTCCTAATCTTCAGATAGCATTTGATTTCTATAACCATTATGCAAAATCTGTTGGTTTTGGTGCTAGAAAAAGTAAGACTTGGAAAAATAGCAAAGGAGAATATGTGAAGCAATTGTTTGTGTGTTCTCGTGAGGGATTTAGACCAGAGAAATATTATAATATGGAAAACAGAAAAAGAGAGCCAAAATCTGAGACTCGTTGTGGTTGCCTGGCTAGGTTTGTAGTTCGTTTTGTGGCTTACACTGGAAGATGGCATGTGGCTTTGTTTGTTGAATCGCACAATCATGATTGCCTTGATCCTAAGTTAGTTGGTTTCCTTCCTACACATAGAAAAATGGCAGAAGCTGATGCTAGTCAAATGAACAACATGAAGGATGCAGGTATTAGCACACCCCATATATATGCTATGTTAGCTAATCAAGCAGGTGGTTATGAAAATGTTAATTATACCTTAAGGGATATGTATAATGAGATTGTTAGGCGAAGGCGTCATGTCCTGGGTGATGCTAGAGCGGCATTGCGATACCTCAAAAACCAGAAATCTGAAGATACAAACCTCTATTATGAGCACATAGTTGATGCTAAAGGGGTATTGCGAGCTTTATTTTGGTGTGATGGAAGAAGCCAATTAGATTATGAAGTATTTGGAGATGTGCTTGCCTTTGATGCGACATACAAGAAGAACAAGTACTTGTGTCCGGTAGTAGTGTTTTCCAGTGTGAATCATCACAACCAAACAGTGGTATTTGGAAGTGCTCTAGTTACCGATGAGAGTAAAGAGGTCTACGTGTGGTTATTACAGCAATTATTGGCAGCCATGAAGGGAAAAGCACCTGTATCTGTGATTACAGATGGTGCTCCATCAATGAGATTTGCAATTGAGACGGTATTCCCAAATGCCCATCATAGATTATGTGCTTGGCACCTCATTCGGAACGCCACAAGTAACGTTGGAAATCCAAAATTTACATCTATGTTTAAGAAGTGCATGCTAGGAGATTATGAAATTAGTGTGTTTGAGCAGAAGTGGTTTGGAATGGTTGAGGAGTTTGGTGTAGCTGAAAAGAATTGGATTATTGACATGTACGAGAAAAGGCATATGTGGGCCACTGCACATATTGGAGGTAAGTTTTTTGCAGGATTTAGGACAACTTCTCGATGCGAAGGTTTGCACTCTATTATTGCAAAATATGTTAAATCTCAATACAATTTGGTTGATTTCATAAAGCATTTTAAGCGGTGTCTTACCTACCTAAGATATAAGGAGGTTGAAGCTGACTATGTTTCCATATCTGGTCTTCCAGTACTTAAAATAGCATTAGAACCTCTAGAAAGGTCTGCATCAAATTTCTATACACGAGAGATATTTTTTATATTTCGAGGCATGCTTGTTAGGGCTGCAAGAATGAAGGTTGTGCAAGATGTGGCATTTGATTCATTTGTACTTTATACAATATCTAAATATGGAAGTCTAAATAGTTCATGGGAGGTGTCTGTAGATAATGAAAGGACGAAATTTAATTGTTCATGCTTAAGGATGGATTCTTTTGGAATTCCGTGTGAGCATATAGTTTGTGTGCTGGTGTTTTTTAACATCCTTGAGCTGCCAAAGTCTCTTGTGTTGACAAGATGGTCGAAGAATGCCAAGACAAGCACTTTCGATTCAAGTGGCGTTACTTGGGAGTCTATAATATTGAGTCAATATGGTTGCTTGATGGATTGGTGTCGGCAGTTGTCCTATGTCGCTAGTCGAAGGCAGGAGAGATTCCACCTTGTTCGAGATATTGTTATGAGCCTAATCGAAGATTTCAAGATTGAAGATGAACAAGAAAAGCAAGTTGGTGCTGAAGCTGATTATTCAGATGGTATTTTTCCTAAGAATCCACAAAATTGTAGGTCTAAGTGTCGTCCTGGTGAGAAGGTAAAACGAAAACCACAACGATGTAGTATTTGTCGCATGGAAGGGCACAATAAAAAATCTTGTCCATTGGCAAAGGACATTCAGCAGCAGACCAATGCAACTTCTTATGGTATAAATAGGAACCATGTTGAGGAAGGTTTGGATGCAGATGCAGAAATGGAATTTTGGGCATCTGATCTTGAAGAAGATTATGAAGAACAAGAGTTTTGGGCAGGAGATTCTGATGCAAGTGCCGACATGGAACTTAGTGAAGAGTTCTCGATGTAG 2538 0.3889 MEHAPDNGGSNGGFNSGTREVRPPDLEVDDKMEERVFFDEMIEESDDTEEFQGMYQDEIEQEAVNSEDLGEQEFQAMFDGNDFSHEVDELYRIEDIENIAMVDFLNIGAHEMECFHFPNLQIAFDFYNHYAKSVGFGARKSKTWKNSKGEYVKQLFVCSREGFRPEKYYNMENRKREPKSETRCGCLARFVVRFVAYTGRWHVALFVESHNHDCLDPKLVGFLPTHRKMAEADASQMNNMKDAGISTPHIYAMLANQAGGYENVNYTLRDMYNEIVRRRRHVLGDARAALRYLKNQKSEDTNLYYEHIVDAKGVLRALFWCDGRSQLDYEVFGDVLAFDATYKKNKYLCPVVVFSSVNHHNQTVVFGSALVTDESKEVYVWLLQQLLAAMKGKAPVSVITDGAPSMRFAIETVFPNAHHRLCAWHLIRNATSNVGNPKFTSMFKKCMLGDYEISVFEQKWFGMVEEFGVAEKNWIIDMYEKRHMWATAHIGGKFFAGFRTTSRCEGLHSIIAKYVKSQYNLVDFIKHFKRCLTYLRYKEVEADYVSISGLPVLKIALEPLERSASNFYTREIFFIFRGMLVRAARMKVVQDVAFDSFVLYTISKYGSLNSSWEVSVDNERTKFNCSCLRMDSFGIPCEHIVCVLVFFNILELPKSLVLTRWSKNAKTSTFDSSGVTWESIILSQYGCLMDWCRQLSYVASRRQERFHLVRDIVMSLIEDFKIEDEQEKQVGAEADYSDGIFPKNPQNCRSKCRPGEKVKRKPQRCSICRMEGHNKKSCPLAKDIQQQTNATSYGINRNHVEEGLDADAEMEFWASDLEEDYEEQEFWAGDSDASADMELSEEFSM 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04207 845 Pfam MULE transposase domain 335 429 IPR018289 -
Aip03g04207 845 ProSiteProfiles Zinc finger SWIM-type profile. 612 648 IPR007527 GO:0008270
Aip03g04207 845 MobiDBLite consensus disorder prediction 1 30 - -
Aip03g04207 845 PANTHER OS02G0262500 PROTEIN 117 702 - -
Aip03g04207 845 Pfam FAR1 DNA-binding domain 125 215 IPR004330 -
Aip03g04207 845 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 117 702 IPR031052 GO:0006355
Aip03g04207 845 SMART 26again6 623 650 IPR006564 GO:0008270
Aip03g04207 845 MobiDBLite consensus disorder prediction 823 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04207 Aip-Chr3 126194872 126197888 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g04207 MULE 7.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04207 - - adu:110280242 1418.68