Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04197 ATGGATCCGGGTGCGATGATGAACGAGGGCTCCTTTGGGAATGGGGGAGGCAATACGGTGCCGTTTAGCTTGGCGGAGATCTGGCCGTTTCCGCAGGCCGTCAACGCTGCTGGAGGCGGCGCCTTGGGGCTCAGGAGGCCGCAGTTTGGCTTGGGACAGTTTGGGGATTTCATTGCCGGTCCCAACCGGGAACCTGGACCGGTTGCTTCAGAACAGAAGGCGGCCAGCGGTGGCGGTGGCGGTGGTAGTAGGAAGAGGCGTGAATCAGAGGAGGAATCCCCTAAGGGTGTTTCCACCAGCAATGTTGCACCTAATGCCTGTCTGTGTGGATTGGGCAGAATGATGGGGATGGAAAACGGCTTAAAGGAGGAGGAGGAGCGTCAAGCCAGTTCAGGAAAGCCTGCGGACCAAAATAATCAGACACCACCACCTGACCCTCCTAGGCAAGATTACATCCACGTCCGAGCCAGAAGGGGTCAAGCTACTGATAGCCACAGTCTTGCTGAAAGAGCTAGAAGGGAAAAGATTAGTGAAAGGATGAAAATTCTTCAGGATTTGGTCCCTGGTTGTAATAAGGTTATTGGAAAAGCATTGGTCCTTGATGAGATAATTAATTATATCCAATCCCTTCAGCGTCAAGTTGAGTTTTTGTCAATGAAGCTTGAAGCAGTGAATTCAAGACTGAACACTGGCATTGAAGCTTTTCCTCCTAAAGATTTTGGTCAGCAAACATTTGATCCGGCGAGCTTGCCATTTGGTTCTCAGGCTACTAGAGACTATAGCAGAGGTTCTTCCCCAGAGTGGTTACATATGCAGGGAAATTCAATATCTACTACAAAATACAACGTTTTAACCTTTTTACCAAAAGGATTATTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTTCAATCTCAATTTTGTCAACCACACCAATTAGTCCTGTCTCTCCAATTACCAATGTACTTCCTCTATCCTTGGTTCTTCTCGCATCTCTTATTAAGGAAGCTTGGGAGGACTGGAAGCGCTTTCAAAATGACATGGCCATAAACAATAAAATGGTAGATGTTTTGCAAGATCAACGGTGGGTTTCTGTACCCTGGAAAGCGTTGCAGGTTGGAGACATTGTCAAGGTTAAGCAGGATGAATTCTTTCCAGCAGATCTGCTTTTCATGGCTAGTACAAATGCAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAACTTGAAGATAAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCACCGAAAGCATCTGAGTTTAAAGGTGAAATTCAATGTGAACAACCAAACAATTCGCTGTATACCTTTACTGGAAATCTTATATTGGACAATCAAACATTGCCTCTCAGTCCAAATCAAGTTTTGCTGCGAGGATGCAGTCTCAGGAATACGGAGTATATTGTTACGGTGGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCAATGAACGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAACTTGACAAGCTCATACTCACTCTATTTGTAACTCTCTTTGTGATGTGCTTTGTTGGAGCCACGGGCAGTGCACTCTTCGTAGACAAGAAATATTATTACTTGCATCTTGATTCAATTGAGGAGGGCTCATCACAGTTTAACCCTAACAACAGATTTTTGGTTCTTATTCTGACTATGTTTACCCTTATCACACTATACTCTTCAATCATTCCCATTTCTCTTTATGTCTCTATAGAGATGATAAAATTTATCCAGTCTGCTCAGTTTATTAACAAGGACTTGCATATGTATCATAGTGAAACCAATACGCCTGCATTAGCTAGGACGTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTTACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGTGGGGAGGTGTATGGACATGGTGTGACAGAAATTGAAAGGGGAATAGCAGAGCGCAATGGCATGAAAATTGAGGAAAAAAGATCACCCAATGCAGTGCAAGAGAAAGGTTTTAATTTTGATGATACTAGGATTATGAGAGGAGCATGGAGGAATGAGTCTAATCCTGATATCTGCAAGGGGTTCTTCAGATGTCTTGCTATATGTCATACAGTACTTCCTGAGGGTGAAGAGTCCCCTGAAAAGATTAAGTATCAAGCTGCGTCTCCTGATGAGTCTGCTTTGGTTATTGCTGCAAAGAACTTTGGTTTCTTTTTTTACAG 2288 0.4344 MDPGAMMNEGSFGNGGGNTVPFSLAEIWPFPQAVNAAGGGALGLRRPQFGLGQFGDFIAGPNREPGPVASEQKAASGGGGGGSRKRRESEEESPKGVSTSNVAPNACLCGLGRMMGMENGLKEEEERQASSGKPADQNNQTPPPDPPRQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNSRLNTGIEAFPPKDFGQQTFDPASLPFGSQATRDYSRGSSPEWLHMQGNSISTTKYNVLTFLPKGLFEQFRRVANLYFLSISILSTTPISPVSPITNVLPLSLVLLASLIKEAWEDWKRFQNDMAINNKMVDVLQDQRWVSVPWKALQVGDIVKVKQDEFFPADLLFMASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPPKASEFKGEIQCEQPNNSLYTFTGNLILDNQTLPLSPNQVLLRGCSLRNTEYIVTVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFVTLFVMCFVGATGSALFVDKKYYYLHLDSIEEGSSQFNPNNRFLVLILTMFTLITLYSSIIPISLYVSIEMIKFIQSAQFINKDLHMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGHGVTEIERGIAERNGMKIEEKRSPNAVQEKGFNFDDTRIMRGAWRNESNPDICKGFFRCLAICHTVLPEGEESPEKIKYQAASPDESALVIAAKNFGFFFY 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04197 762 SMART finulus 166 216 IPR011598 GO:0046983
Aip03g04197 762 Coils Coil 207 227 - -
Aip03g04197 762 Gene3D - 334 500 - -
Aip03g04197 762 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 270 762 - -
Aip03g04197 762 SUPERFAMILY Calcium ATPase, transduction domain A 353 497 IPR008250 -
Aip03g04197 762 SUPERFAMILY Calcium ATPase, transmembrane domain M 273 630 IPR023298 -
Aip03g04197 762 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 272 762 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Aip03g04197 762 MobiDBLite consensus disorder prediction 122 150 - -
Aip03g04197 762 Gene3D - 650 762 IPR023299 GO:0000166
Aip03g04197 762 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 210 IPR011598 GO:0046983
Aip03g04197 762 CDD bHLH_AtBPE_like 150 235 - -
Aip03g04197 762 MobiDBLite consensus disorder prediction 55 102 - -
Aip03g04197 762 ProSitePatterns E1-E2 ATPases phosphorylation site. 638 644 IPR018303 -
Aip03g04197 762 Pfam Phospholipid-translocating ATPase N-terminal 272 322 IPR032631 -
Aip03g04197 762 Pfam Helix-loop-helix DNA-binding domain 164 211 IPR011598 GO:0046983
Aip03g04197 762 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 158 227 IPR036638 GO:0046983
Aip03g04197 762 Pfam E1-E2 ATPase 353 589 - -
Aip03g04197 762 Gene3D - 157 233 IPR036638 GO:0046983
Aip03g04197 762 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 270 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04197 Aip-Chr3 126063595 126083572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04197 269 762 Primary Pumps ATPases AT1G59820 76.364 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip03g04197 E1-E2_ATPase 2.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04197 K14802 - gmx:100815547 877.856
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04197 03 126063595 126083572 Aip03g04197 03 126063595 126083572 ECH