Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04195 ATGTCAAGACTTTGCACCACCTTTAGAACTCTTCTACCTTTTGAATATATTAAGGGAAAGCGGTCAACTTCTGATCACATGCATGAGGGGGTGAAATACATCAAACACTTACAGAATAGGGTGGAAAAGTTGCAAGCCAAAAGGGATGATGGCGCTGAGTGGGAGAGCCCAGAAACACTGCTGGCGCTGGGTGGTGGCGTCTCAACGGCGACGGCGTGGTGCTGTGCGTGGGCGACGGCGTCGTGCTGTGGGTGGCGTCTCCGCGAAGAGGAAGGCTTCGGCGTGGTGCTGTGGGATGGCGTCGTGCTTTGGGGATTTGGAGAAGAGAGAGCGAGAGCGACTAAGCAAGTGAGCACTGAGCAGTAG 366 0.5437 MSRLCTTFRTLLPFEYIKGKRSTSDHMHEGVKYIKHLQNRVEKLQAKRDDGAEWESPETLLALGGGVSTATAWCCAWATASCCGWRLREEEGFGVVLWDGVVLWGFGEERARATKQVSTEQ 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04195 121 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 50 IPR015660 GO:0003700|GO:0006357
Aip03g04195 121 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 49 IPR036638 GO:0046983
Aip03g04195 121 PANTHER TRANSCRIPTION FACTOR 1 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04195 Aip-Chr3 126022211 126022927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04195 1 50 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 52.000 2.87e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04195 - - adu:107466968 104.76