Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04187 ATGGCTTTGAATTTCATGCTTCTTCAACCAAGGATTCTTCTTCTACTGACCCTTCTTGTGTTTTCTGTTTGTTTTTTATTACCAAAATGCCATTCTCAAACCACTTCACCTCAAAACATTGAAACTTTCTATCCTAATGAAACTTCAGCTCCACCACCGGCGGCAGCGCAGAGGCCTGAGGCTCCGAAAGAGCCTCAAACCTCGCTGCAGCCGCCGGTGGCTGCGCCTAGAAGAAGTAGTAATTCATCATCAAGTGGTAAGGTGGCTAAAGCTGTAGCTGCAACTGCTGCAACCACCATAGTTGTCTGTGGTTTTCTCTTCTTTTTAGTCCACATGTGCTTAAAGGCAAGAAAGAGAGAGGAGGTAACAACCAATAACAATGCTCCGGCGGCGGCGCCTCAAGGGAACGCGTTCGAGAAAATCGAAGGGAATGTGAAGGGACTAATTGTTGATGAGGATGGTTTGGATGTGATTTATTGGAGAAAGCTTGAAGGGAAAAGATCCAAGAAGGATCTTCATAAGGAGATTCTCAGAAACAAAGAAGAAGAAGAAGATAATGTCAAGAAATCTAAATCCATTCAAGAAACCCCTCTTCTCAGAGGAAAATCTTCAACCTCACACATGAACATAGTTCCAGAAGTGGATGAGCCATATCAGATGACAAGAATTCCCTCTCAAAATCAATCATTCATCCCTCCTCCTCCTCCTCCTCCAATTCCAGCAAGAAAATCATCATCAAAGAAAACACCACCTACTCCTACTGAAATGGTAGTTACCTCCACCAGCAAGAGGATGAACTCTTTGGGAAAAGGTGCAGTGGAATCAGGCACTGAGAATGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATGCTGATCACTCCATGGTTTGGGACAATGTTGATCGCGGTTCATTCAGGGTTGATCAAGATCTTATGGTGGCTCTGTTCGGCTATGTCGCGGCGAACCGGAGATCTCCTAAGGGAAAGAATCCGGCGGCAGGGTCGACGAGAATTTTCCTTCTAGACTCAAGAAAATCACAGAACATTGCTATTGTTGTGAAATCTCTGGCAATCTCGCGAGACGAAATCATTGATGCAATGATTGATGGTAGAGGGCTTAATGCAGATAGCCTTGAGAAGCTTGTTAGAATTGCTCCAACACAAGAGGAGCAATCTCTTATCATAGAATACAAAGGAGACCCTGCAATTCTTGCTTCAGCTGAATCATTCCTCTTTCACATCCTTAAATCCGTTCCTTCGGCCTTTAAGCGCTTGAATGCCATGCTGTTCAGGTTGAACTACAGTTCTGAGATTCTAGAAATCAAGGAGTCTCTGCAGGTTCTTGAACTGGGGTGTAAAGAGCTTAGGAGCCAGAGAATCTTTGTGAAGCTTCTAGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGGACTGCCAGAGGTAATGCTCAAGCTTTCGATTTGGCTTCTCTGAGGAAACTCTCTGATGTCAAAAGCACAGATGGAAAAACCACATTGCTTCATTTTGTGGTGGAAGAAGTAGTCCGGTCCGAAGGCAAGCGCATTGCTCTTAACAGCCGCGAAATCAATGAGAAGAATGCAGCTTCAGATGAACAAAGAGAAAGGGAATACATAACATTAGGATTACCAATTATAGGAGGGATTAGTTCTGAGTTTTCTAATGTCAAGAAAGCAGCAGTTATAGACTACAACACATTAGTTGCTTCAATCTCTGCCGTCTCCACGCGAATCATCGAAATTCAAGAACTAGTTTCCCAATGTGGGAATGGGGAAGGAGGCTATTTTGCCAAAGAGATGGATAATTTTGTTCAGAACTCTAAGGAGGAATTGAAATTTGTGAGGGAGGAGCAAGCAAGGGTAATGCAGGCTATCAAGAGAACAAGAGAATACTATCAAGGAGGAGCTTCAAGAGAGAGTGCAGAACAGAGTCTTCAATTGTTTGTGATTGTGAAGGATTTCATGGGGATGGTTGATCAAGCTTGCATCGAGATTGCGCGAAATATGCAGAAGAGGAAGACACACAAGGCAGCTTCTTATGGCTAG 2076 0.4379 MALNFMLLQPRILLLLTLLVFSVCFLLPKCHSQTTSPQNIETFYPNETSAPPPAAAQRPEAPKEPQTSLQPPVAAPRRSSNSSSSGKVAKAVAATAATTIVVCGFLFFLVHMCLKARKREEVTTNNNAPAAAPQGNAFEKIEGNVKGLIVDEDGLDVIYWRKLEGKRSKKDLHKEILRNKEEEEDNVKKSKSIQETPLLRGKSSTSHMNIVPEVDEPYQMTRIPSQNQSFIPPPPPPPIPARKSSSKKTPPTPTEMVVTSTSKRMNSLGKGAVESGTENVKLKPLHWDKVNTNADHSMVWDNVDRGSFRVDQDLMVALFGYVAANRRSPKGKNPAAGSTRIFLLDSRKSQNIAIVVKSLAISRDEIIDAMIDGRGLNADSLEKLVRIAPTQEEQSLIIEYKGDPAILASAESFLFHILKSVPSAFKRLNAMLFRLNYSSEILEIKESLQVLELGCKELRSQRIFVKLLEAVLKAGNRMNAGTARGNAQAFDLASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRIALNSREINEKNAASDEQREREYITLGLPIIGGISSEFSNVKKAAVIDYNTLVASISAVSTRIIEIQELVSQCGNGEGGYFAKEMDNFVQNSKEELKFVREEQARVMQAIKRTREYYQGGASRESAEQSLQLFVIVKDFMGMVDQACIEIARNMQKRKTHKAASYG 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04187 691 MobiDBLite consensus disorder prediction 38 85 - -
Aip03g04187 691 PANTHER FORMIN-LIKE PROTEIN 231 687 - -
Aip03g04187 691 PANTHER FORMIN-LIKE PROTEIN 1 229 - -
Aip03g04187 691 ProSiteProfiles Formin homology-2 (FH2) domain profile. 272 691 IPR015425 -
Aip03g04187 691 SUPERFAMILY Formin homology 2 domain (FH2 domain) 232 685 - -
Aip03g04187 691 MobiDBLite consensus disorder prediction 224 276 - -
Aip03g04187 691 Pfam Formin Homology 2 Domain 277 668 IPR015425 -
Aip03g04187 691 MobiDBLite consensus disorder prediction 228 244 - -
Aip03g04187 691 MobiDBLite consensus disorder prediction 245 268 - -
Aip03g04187 691 Gene3D Formin, FH2 domain 274 680 IPR042201 -
Aip03g04187 691 Coils Coil 163 183 - -
Aip03g04187 691 SMART it6_source 274 683 IPR015425 -
Aip03g04187 691 PANTHER FORMIN-RELATED 231 687 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip03g04187 691 PANTHER FORMIN-RELATED 1 229 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04187 Aip-Chr3 125888649 125891184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04187 16 683 FH2 protein (formin) Gene Family AT1G70140 46.559 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04187 - - adu:107481275 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04187 03 125888649 125891184 Aip03g04187 03 125888649 125891184 ECH