Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04184 ATGGAAAAGAAGAATGTCTATGATGCTTCAACATGGGATGATGGTGTTGAAAATAATAATGGGCATTCATCAAAACACAAGAGGCTCAAGTTATTTGGGTTTGAACTAATAAACCCAAAGGATCATTCAGAAGATGAAAGTGTGAATTCTTCAAATTCAGCTTCATTATTATTGGAGGGAGATCATGATGAGAAAAATAATAATAATAAAAAATTAGAGTGTCAATATTGTTACAAGGAATTCGCAAATTCACAAGCACTAGGAGGACACCAAAATGCACACAAAAAAGAGAGAATGAAGAAGAAGAAGTTGCAGCTTCAAAAAACTAATGCTACCACAATCAACCACTACCTTCTACAGCAAGCAAGCTCCAATATCAATAATATTATTGATAATTGGTTATATAATCCTTCTTCCTTTATTAGTAATAATTCTGAATCTCAGATTAGCTTTAATAATAATGATCAAGATGATGATGATGGTCTTATTCATGTTTCAAAGTATTCTCATGATCAACAAGAAAATTATTGTATGTTCAATTTCTCCCATGCTAGTTCGAATCATCATCAGGGACATGTCAAAAGTTTGGATCTTCAGCTAGGCCTCAGCTTGGAGTCAAATACAAGAACTTTTTTATGGAGAACATAG 648 0.3272 MEKKNVYDASTWDDGVENNNGHSSKHKRLKLFGFELINPKDHSEDESVNSSNSASLLLEGDHDEKNNNNKKLECQYCYKEFANSQALGGHQNAHKKERMKKKKLQLQKTNATTINHYLLQQASSNINNIIDNWLYNPSSFISNNSESQISFNNNDQDDDDGLIHVSKYSHDQQENYCMFNFSHASSNHHQGHVKSLDLQLGLSLESNTRTFLWRT 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04184 215 MobiDBLite consensus disorder prediction 1 24 - -
Aip03g04184 215 Gene3D Classic Zinc Finger 47 127 - -
Aip03g04184 215 ProSitePatterns Zinc finger C2H2 type domain signature. 74 94 IPR013087 -
Aip03g04184 215 ProSiteProfiles Zinc finger C2H2 type domain profile. 72 99 IPR013087 -
Aip03g04184 215 PANTHER ZINC FINGER PROTEIN 5 1 203 - -
Aip03g04184 215 SUPERFAMILY beta-beta-alpha zinc fingers 68 99 IPR036236 -
Aip03g04184 215 PANTHER ZINC FINGER PROTEIN 5 1 203 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04184 Aip-Chr3 125828784 125829476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04184 28 148 C2H2 Transcription Factor Family AT1G68360 37.226 4.35e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04184 - - ahf:112791844 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04184 03 125828784 125829476 Aip03g04184 03 125828784 125829476 ECH