Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04176 ATGCCTCTTTCCACCTGCTCCGATTGCCACCATGACCTCCTCTGCTGCGAGGACTCCTCCGGAATCCTCTCCACACAACACTCGCCGGAATCACCCTCGTCATCGTCTTCTTCATCTTCTTCATTGTCGTCGTCGTGGACGGAGGAATCCATCGCGTGTTTCATGGAGCACGAACGCAACTTCGTCCCCGGATTGGAGTACCTCTCCAGGTTTCAGTCTCGCTCCCTCGACGCCAACGCAAGAGAACAATCCGTTGCATGGATCCTCAAGGTTCACTCGTACTATGGCTTTCAGCCTCTGACGGCATACCTCTCCGTTAATTACTTGGATCGGTTTTTGGATTCTCGCCACCTGCCGCAAACAAGTGGGTGGACTCTTCAGCTTCTATCAGTTGCTTGTTTGTCTTTAGCGGCAAAGATGGAGGAACCTCTTGTTCCCTCTCTCTTGGACCTTCAGGTGGAAGGAGCCAAATACGTATTTGAGCCGCGAACCATACGTAGGATGGAGCTACTTGTTCTTAGTGTGTTGGATTGGAGGCTGAGATCAGTTACCCCACTTAGCTTCCTTGGTTTCTTTGCGTGCAAAGTTGATTCAGCTGGAACTTTTACTCCCTTCCTCATTTCTCGAGCTACGGAAATCATCTTGTCTAATATCCAAGAGGCTAGCTTTCTTGCATACAGGCCATCATGTATTGCTGCCGCAGCAATACTCTGTGCAGCTAATGAAATTCCTAATTGCTCTCTTGTTAAGCCTGAGAATGCTGAATCATGGTGCCAGGGACTAAGAAAAGAAAAAATTATAGGGTGCTACCAGTTGATGCAAGAACTTATTGTGATTCACAGTAATCGGAGAATAAATCCCCCTAAGTATTTGCCACAGATGCGAGTAACAACTAGGACCCGAATGAGGTCGAGTACTACTACTGTTGCATCATCATTCCCCTCGCCCTCTTCTTCATTATCCTTGTCTTACAATAAAAGGAGAAAATTAAATGACTGTTTGTGGGTGAATGAAGATGAAAAGGGGAACTCCGTGTGA 1038 0.473 MPLSTCSDCHHDLLCCEDSSGILSTQHSPESPSSSSSSSSSLSSSWTEESIACFMEHERNFVPGLEYLSRFQSRSLDANAREQSVAWILKVHSYYGFQPLTAYLSVNYLDRFLDSRHLPQTSGWTLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYVFEPRTIRRMELLVLSVLDWRLRSVTPLSFLGFFACKVDSAGTFTPFLISRATEIILSNIQEASFLAYRPSCIAAAAILCAANEIPNCSLVKPENAESWCQGLRKEKIIGCYQLMQELIVIHSNRRINPPKYLPQMRVTTRTRMRSSTTTVASSFPSPSSSLSLSYNKRRKLNDCLWVNEDEKGNSV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04176 345 Gene3D - 54 244 - -
Aip03g04176 345 PANTHER CYCLINS 5 329 IPR039361 -
Aip03g04176 345 ProSitePatterns Cyclins signature. 81 112 IPR006671 -
Aip03g04176 345 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 5 329 - -
Aip03g04176 345 SUPERFAMILY Cyclin-like 43 180 IPR036915 -
Aip03g04176 345 SMART Cyclin_C_2 183 310 IPR004367 -
Aip03g04176 345 CDD CYCLIN 81 173 IPR013763 -
Aip03g04176 345 Gene3D - 64 181 - -
Aip03g04176 345 Pfam Cyclin, N-terminal domain 51 180 IPR006671 -
Aip03g04176 345 SUPERFAMILY Cyclin-like 165 294 IPR036915 -
Aip03g04176 345 SMART cyclin_7 86 174 IPR013763 -
Aip03g04176 345 Pfam Cyclin, C-terminal domain 183 282 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04176 Aip-Chr3 125724544 125727880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04176 12 339 Core Cell Cycle Gene Families AT1G70210 61.515 4.38e-130 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04176 K18810 - gmx:100778578 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04176 03 125724544 125727880 Aip03g04176 03 125724544 125727880 ECH