Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04163 ATGACCATCAATCTTGGGACCCAACAACTAATGATCTTTTTTCAAGTGACGTCTTCTAAAAAACCGGAGCAAACAAGACGGGCGAACCGAAAAATAGCTAATGTCCACGAAACGGTGAACCGGAATCGGACGGTTTACTCGGACTACTCAACCACCAAGCTCCTCACTGAACTCCATCTCTTATCCTTCTTCTCTTCTGCTGATCTTCGTTCCCTCCTCCTGCAGACTGTCGCCGGGACACGTCCCTCAGTCAGCCGGTGCCGTCCTTTCACTGGAGTAGGTTGCAGAGGCAGAGGTAGAGGGAGAAGGACTGAAATTGGAGTCGGTGGTGAGGAAGAGGAACAGAGTGCGGCGGCGAAAGTAAAAGCCACAACTCGGATTGGATATTTTATTATTTTCAATTCTCTACACTTCCGTTCCGTGTTCCGTGTTCCAAGAGAAGAACTTGCTTGTGTTCCGTTTTTGAGCTACGAGCTTCAAATTCACTTGAATACGGCCAAGTGCCAAATGAGTTTGAGTGCGAGCTATTGTGCAAGTTACGGTCTTCGTCTTCGACCTTGCGGAGTTGCAAACTGCAATCTTGAACGACATGGCAGGAATATTGTTCCTATCAACACATCGAAGGAACTTCCAAAATATGACAACTGTCTTCAATCAAAGTTGAAGATTGGTACTAGCAATAGTGTGAAGACATTAATGGGTGCTATGGCAGTGACACACTTGATTGCTCCAGTTGCTGCAAAAGCTGAAGTAGCTGCTTCTGTTTATTCTTTGGCTGATGCAAACCTAAGTGACTGGTTTGGAGGTTTATTGTATTCAGCTGGGCAACAGGCCAATGAAGCTGTTCAGAGTCAATTATCTTCTCCCAGTTTCACTAGTTTGGCAGTAATTTTTGGGGCAGGGCTTGTGACCAGTCTTTCTCCTTGTACACTCAGTGTCTTACCGTTGACCCTTGGTTACATTGGGGCATTTGGCTCTGGAAAAAGTAGAGCAGAGGTTATTGGGGATTCAATTGCATTCTCCTTGGGTCTTGCAACAACGTTAGCCCTTTTGGGAGTCGCTGCATCATTTGCTGGAAAGGCTTATGGACAGATAGGCCAAGGATTACCACTGGCTGCTTCTGGTTTGGCTGTAATTATGGGTCTGAACCTTCTTGAGATCATTGAATTGCAGCTCCCCTCGTTCTTCGACAGTTTTGATCCACGTGCAGCAGCTGCCAATTTCCCATCAAGTGTGCAAGCATATCTGGCTGGGCTTACATTTGCTTTAGCTGCCTCGCCTTGCAGCACACCTGTACTGGCTACCCTTCTAGGTTATGTTGCTGCATCCAAGGATCCAGTGATTGGAGGCAGCTTCCTTTTGACATACACAACTGGTTATGTTGCTCCCTTACTCTTAGCTGCTTCTTTTGCTGGAGCATTACAGAGCTTGCTTTCATTTCGCAAGTTCTCAGCATGGATCAATCCCATAAGTGGAGCAATGCTGCTAGGAGGTGGTGTGTATACTTTCTTAGATAGGCTCTTCCCTGCAACAATGGTGATGTAG 1545 0.4647 MTINLGTQQLMIFFQVTSSKKPEQTRRANRKIANVHETVNRNRTVYSDYSTTKLLTELHLLSFFSSADLRSLLLQTVAGTRPSVSRCRPFTGVGCRGRGRGRRTEIGVGGEEEEQSAAAKVKATTRIGYFIIFNSLHFRSVFRVPREELACVPFLSYELQIHLNTAKCQMSLSASYCASYGLRLRPCGVANCNLERHGRNIVPINTSKELPKYDNCLQSKLKIGTSNSVKTLMGAMAVTHLIAPVAAKAEVAASVYSLADANLSDWFGGLLYSAGQQANEAVQSQLSSPSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVIGDSIAFSLGLATTLALLGVAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDSFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVAASKDPVIGGSFLLTYTTGYVAPLLLAASFAGALQSLLSFRKFSAWINPISGAMLLGGGVYTFLDRLFPATMVM 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04163 514 Pfam Cytochrome C biogenesis protein transmembrane region 297 504 IPR003834 GO:0016020|GO:0017004
Aip03g04163 514 PANTHER CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN 226 514 - -
Aip03g04163 514 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED 226 514 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04163 170 514 Chloroplast and Mitochondria Gene Families AT5G54290 68.994 2.38e-141 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04163 - - gmx:100807029 550.436