Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04143 ATGGCTTCTTCTTCAACCAGGATCTCCAGGCTTCTCTCTCGCTCCTCCGCCTCTCTCTTTTCGCGAGGTGGGAAGGGTTACCTTGGTACAGGATTCAGCAGATATAGCACTGCCACTGCCCTTGAAGAAGAACCAATTAAACCAGCAGTGCAAGTAGAACACACCCAACTCCTGATTGGTGGGAAATTCGTTGATGCTCTTTCTGGTAAAACTTTTCCAACCTTGGATCCAAGAACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATAGAGCAGTTGCAGCCGCAAGAAAGGCATTTGATCAAGGTCCATGGCCTAAGATGACAGCCTATGAAAGGCAAAGGATATTGTTGCGAGCCGCCGATCTGCTTGAGAAGCACAATGATGAGCTTGCAGCACTTGAGACCTGGGATAATGGGAAGCCATATGAACAATCTGCTCAGATTGAAATCCCAATGCTTGTTCGCCTTTTCCGGTACTATGCCGGTTGGGCAGATAAGATCCATGGTATGACAGTTCCGGCTGATGGGCAATATCATGTGCAAACATTGCACGAACCGATCGGTGTTGCTGGTCAGATCATTCCCTGGAATTTCCCTCTCCTCATGTTTGCTTGGAAGGTTGGACCGGCATTGGCCTGTGGCAATACAATTGTTCTGAAAACCGCTGAGCAGACACCATTGTCTGCTTTGTACGCAGCAAAACTATTTCATGAGGCTGGACTTCCTGAAGGTGTTTTGAATGTGGTATCAGGCTTTGGTCCCACTGCCGGCGCTGCTCTTGCAAGTCACATGGATGTGGATAAGCTTGCCTTTACTGGTTCTACTGATACCGGGAAAGTTGTCCTTGAGCTAGCGGCTAGAAGCAATCTTAAGCCAGTAACTTTGGAGCTTGGTGGAAAATCTCCTTTTATTGTATGTGAGGATGCCGATGTAGATCAGGCGGTTGAGCTAGCACACTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTAGGACATATGTACATGAGCATGTATATGACGAGTTTGTAGAGAAAGCAAAGGCTCGTGCTTTGAAACGTATTGTTGGTGATCCATTCAAGAGTGGAATAGAGCAAGGTCCGCAGATTGATTCTGAACAATTTGAGAAGATACTGAAGTATATCAGATCCGGCGTTCAAAGTGGAGCTACACTAGAAACCGGAGGAGATAGACTTGGCAGCAAGGGCTTCTATGTTCAGCCTACCGTCTTCTCAAATGTTGAGGATGGCATGCTGATTGCAAAGGAAGAAATATTTGGCCCGGTGCAATCCATACTAAAATTCAAGGACCTCGATGAGGTTATTGAAAGAGCGAACAACACGCGGTATGGACTGGCGGCAGGGGTGTTCACGAAGAACATAGACACGGCAAACACGCTGACGAGAGCGTTGAGAGTTGGAACAGTTTGGGTGAACTGCTTTGACACATTTGATGCAGCAATTCCATTTGGTGGTTACAAGATGAGTGGGCAGGGAAGGGAAAAGGGAGAGTACAGCCTCAAGAATTACTTGCAAGTCAAGGCAGTTGTTACCCCTTTGAAGAACCCTGCATGGCTTTAG 1608 0.4714 MASSSTRISRLLSRSSASLFSRGGKGYLGTGFSRYSTATALEEEPIKPAVQVEHTQLLIGGKFVDALSGKTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARKAFDQGPWPKMTAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGMTVPADGQYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLFHEAGLPEGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKVVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTYVHEHVYDEFVEKAKARALKRIVGDPFKSGIEQGPQIDSEQFEKILKYIRSGVQSGATLETGGDRLGSKGFYVQPTVFSNVEDGMLIAKEEIFGPVQSILKFKDLDEVIERANNTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGEYSLKNYLQVKAVVTPLKNPAWL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04143 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Aip03g04143 535 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 22 535 - -
Aip03g04143 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 307 496 IPR016163 GO:0016620
Aip03g04143 535 CDD ALDH_F2BC 52 527 - -
Aip03g04143 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 69 525 IPR016162 GO:0016491
Aip03g04143 535 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 301 308 IPR029510 GO:0016491
Aip03g04143 535 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 22 535 - -
Aip03g04143 535 Pfam Aldehyde dehydrogenase family 65 525 IPR015590 GO:0016491
Aip03g04143 535 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04143 Aip-Chr3 125299890 125303861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04143 4 535 Aldehyde Dehydrogenase Gene Family AT3G48000 78.212 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04143 K00128 - gmx:100777399 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04143 03 125299890 125303861 Aip03g04143 03 125299890 125303861 ECH
Aip03g04143 03 125299890 125303861 Aip01g01914 01 102566823 102570842 ECH