Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04141 ATGACAATAAGGACCACCTTGAAGCCATTTGCTCAATTCTCATGCCTTCAACTTCACATAACTCCAACTCCAAGCACCAATTGTGTCCTTAACATTCAATACTCTTCAACCTTGAGTAACTCAAACTGTGAACATCATAGTTGGGGAGGATTCATCAATACTTGTTGTCAACCACTTTTTGATGATTATCTATATGCCTTGGGGCATCATGCTAACAAAACTGGAAAGATATTTTTGAACCCCTCAGAGCAAGAAAACTGCTTCGTGCCGGCGAAGAATTTTAAGCTCTGCGGCGGGGTCAAGAAGTTGACAAGGGGAGCTGGCGGTTGCTCTGATTACACTGTTATGGATGTCACCAAGAAGCTTGGTGAAAATTTAAGGAGATTAGATGAAGATTGTATGAATGACAAGCCAAATGGAAACTGCAGTTCATGCTTGAAATCATGGGAGGATATAGTTGTAAGATCAGAGGATACAAAGGAATCAGAATCACAGAGTTTCAGTGATGATGTTTGTAGGTTTGCTGTTCTTATCTCAATGACAAGCATCAAAGTTTATGATAGAGAATCAATTCAGAAAGTTTATAAATGTATAGGGGGAAACACCATTTCTGAAGGTCTCAAGATTCTAGCCTTTGCTTTAACTGGAGTCACAGTAGTAGTACTTCTTGCAGCACTTGCATTTTTTGTCAAAAGAAAAAGAGGTGCTACAACTCCCACATTACTAGAAGTTTATGAGGATTCAGCATCAGTTAAAATAACTTTGAAGGATGTTTATGTAGCAACTAACAATCTCAGCGCCGCGAATTTCATTGGCCAAGGTTCGGCAGGGAAAGTGTACAAAGGTATACTCTCCAATGGTCTACATGTTGCAGTGAAACATATTACCAATGGAAGTTACATGGAAACATTTGTTAGAGAAGTGAAAAGCCTTTCCCATGTTAAACATCCGAACCTTGTTACGCTGCTCGGATACTGCGAAAACAATGAATCTGAATGCTTCCTAGTCTATGAACTGTGCTGCAATGGAAGCCTGTCACATTGGCTATTTGACTATGATAAAGTTCTTTCATGGATTCAAAGACTAGAGATTGCTGTTGATAGTGCAAGAGGCCTCAAGTTTCTACAAACCTACCCAGGTGGCTGCATTGTTCACCGTGATATAAAGCCAGCAAACATTCTTCTTGATGCCAATTTTCAAGCAAAACTTTCAGACTTCGGGTTGTCCAAGGTTATGGAAGTGGATCAATCCTATGTGAGCTCCGAAGTGAGAGGAACATTTGGCTATATAGATCCTGAGTATCGGACAAATCACCATGTGAATGCCTCTGGAGATGTTTACAGCTTTGGCATAGTGTTGTTGCAAGTTCTATCAGGACAAAGGCTCCTTCACAGCAATTTTCACAGACCAATGTCACTAAGTAAAATGGCCAAAGATTCTGCTAGAGGTGGCGATATTTCAGAATTTGCAGACCCTAAACTCAATGGAGAGTATTCTGCAGAAGCATTTGGCATCATACTGAAGCTAGCTTTGTCTTGCATAGGGCTCAAGGAACAAAGGCCCTCTATAGCAAAAGTGTTACATAGTCTAGAAAAGGCACTAGATATCTCATCATCATAA 1620 0.4031 MTIRTTLKPFAQFSCLQLHITPTPSTNCVLNIQYSSTLSNSNCEHHSWGGFINTCCQPLFDDYLYALGHHANKTGKIFLNPSEQENCFVPAKNFKLCGGVKKLTRGAGGCSDYTVMDVTKKLGENLRRLDEDCMNDKPNGNCSSCLKSWEDIVVRSEDTKESESQSFSDDVCRFAVLISMTSIKVYDRESIQKVYKCIGGNTISEGLKILAFALTGVTVVVLLAALAFFVKRKRGATTPTLLEVYEDSASVKITLKDVYVATNNLSAANFIGQGSAGKVYKGILSNGLHVAVKHITNGSYMETFVREVKSLSHVKHPNLVTLLGYCENNESECFLVYELCCNGSLSHWLFDYDKVLSWIQRLEIAVDSARGLKFLQTYPGGCIVHRDIKPANILLDANFQAKLSDFGLSKVMEVDQSYVSSEVRGTFGYIDPEYRTNHHVNASGDVYSFGIVLLQVLSGQRLLHSNFHRPMSLSKMAKDSARGGDISEFADPKLNGEYSAEAFGIILKLALSCIGLKEQRPSIAKVLHSLEKALDISSS 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04141 539 PANTHER OS01G0750732 PROTEIN 23 538 - -
Aip03g04141 539 Pfam SPARK 24 165 IPR043891 -
Aip03g04141 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 383 395 IPR008271 GO:0004672|GO:0006468
Aip03g04141 539 Gene3D Transferase(Phosphotransferase) domain 1 341 538 - -
Aip03g04141 539 Pfam Protein kinase domain 269 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04141 539 PANTHER - 23 538 - -
Aip03g04141 539 SUPERFAMILY Protein kinase-like (PK-like) 248 530 IPR011009 -
Aip03g04141 539 SMART serkin_6 265 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04141 539 ProSiteProfiles Protein kinase domain profile. 265 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04141 539 Gene3D Phosphorylase Kinase; domain 1 227 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04141 Aip-Chr3 125272480 125275430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04141 208 531 Receptor kinase-like Gene Family AT1G70130 39.169 1.93e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Aip03g04141 Pkinase 7.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04141 - - gsj:114395768 692.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04141 03 125272480 125275430 Aip03g04141 03 125272480 125275430 ECH