Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04136 ATGGAGCCTCCATCCATTGTGTCCTTTATTTTCGGAGCTGAGGAGAGATTTGAGGAGGGTTCATGCGGCCTTGGCAAGACAGTTTCAATGATTGCCCTCCTCCTAATGCAGAGGTTACTGCTCTCAAAATCTAAAACAGACTATGCATCCAATCATAAAACTGAAGCTTTGAATTTGGATGATGAAGATGATCGTGTTACTGTTGATGTGGAAAAGCTTGAAAATAAAGAAGAGTCTGATGATGTAAAACCTATTGCAGAACCTAGGAAACGGCCAGCTGTTAGTACACTTGTTGTTTGCCCGGCAAGTGTTCTTTGA 318 0.4214 MEPPSIVSFIFGAEERFEEGSCGLGKTVSMIALLLMQRLLLSKSKTDYASNHKTEALNLDDEDDRVTVDVEKLENKEESDDVKPIAEPRKRPAVSTLVVCPASVL 105
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04136 Aip-Chr3 125185275 125190086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04136 23 105 RAD5 or RAD16-like Gene Family AT1G50410 38.614 2.94e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip03g04136 SNF2_N 2.6e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04136 - - ahf:112712269 134.806