Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04132 ATGTCCGTCTCAGCTGCACTCTCCTCCACACCTTCCCACCTCACCTCTCTCCCTTCCACTACTCCATTTTCTCTCAGATTTTCCCTCCCTTTCCGGGAAAATAACAGGGACCGGTTATTCTTCGGTCCTCAGAGTCGGAGACACTTAGGAGTTGTGGTGGTGAGGTCTCAGGCTACAACCACACCTGCTTCTTCTGAGGCAGTTAAAGCGACGGCTGTGCCTTCTGAGATGAAGGCATGGGTGTACGGTGAGTATGGCGGTGTTGACGTGTTGAAGTTTGATTCCAGTGTTGGTGTCCCTGATGTCAAGGAGGATCAGGTTCTTGTTAAGGTTGTTGCTGCTGCTCTTAACCCTGTCGATGCCAAGAGAAGGCAGGGAAAGTTCAAGGCCACTGATTCTCCTCTTCCGACTGTTCCGGGGTACGATGTTGCCGGAGTGGTGGTGAAGGTTGGTAGCAAAGTAAAGGATTTCAAAGTGGGTGATGAAGTATATGGTGATGTTAATGAGAAAGCACTTGAAGGGCCTAAGCAATTTGGGTCTTTAGCTGAGTACACTGCTGTTGAGGAGAGATTGTTAGCACCAAAACCAAAGAACTTGAACTTTGCTGAGGCTGCTTCTCTCCCTCTTGCAATTGAGACTGCTTATGAGGGTTTGGAGAGGCTTGGATTCTCCCCTGGTAAATCCATTCTTGTTCTAAATGGTTCTGGTGGTGTTGGAACCCTAGTCATTCAGCTAGCTAAGAAAGTTTTTGGGGCTTCAAGAGTTGCTGCCACTTCAAGCACCAGAAATTTGGAGCTGTTGAAAAGCTTGGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTGCCAGAAAAATTTGATGTCGTTTATGATGCCATTGGGCAATGTGAGAGGGCAGTGAAGGCAGTGAAAGAAGGTGGGAGTGTGGTGGCACTAACAGGAGCAGTTACACCACCTGGGTTCAGATTTGTGGTTACTTCCAATGGAGCTGTTCTCAGGAAACTGAACCCTTACTTGGAGAGTGGACAAGTAAAGCCAGTTGTGGATCCCAAAGGTCCCTTCTCCTTTGCTCAGCTTGCTGAAGCCTTCACTTACCTTGAAACAAACCGTGCTACTGGAAAGGTCGTCATAAGTCCCATCCCATAA 1158 0.4793 MSVSAALSSTPSHLTSLPSTTPFSLRFSLPFRENNRDRLFFGPQSRRHLGVVVVRSQATTTPASSEAVKATAVPSEMKAWVYGEYGGVDVLKFDSSVGVPDVKEDQVLVKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSKVKDFKVGDEVYGDVNEKALEGPKQFGSLAEYTAVEERLLAPKPKNLNFAEAASLPLAIETAYEGLERLGFSPGKSILVLNGSGGVGTLVIQLAKKVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCERAVKAVKEGGSVVALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGQVKPVVDPKGPFSFAQLAEAFTYLETNRATGKVVISPIP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04132 385 SMART PKS_ER_names_mod 86 381 IPR020843 GO:0016491
Aip03g04132 385 Pfam Zinc-binding dehydrogenase 270 381 - -
Aip03g04132 385 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 226 247 IPR002364 GO:0008270|GO:0016491
Aip03g04132 385 CDD MDR_like_2 77 381 - -
Aip03g04132 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 199 321 IPR036291 -
Aip03g04132 385 Pfam Alcohol dehydrogenase GroES-like domain 105 167 IPR013154 -
Aip03g04132 385 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 50 385 - -
Aip03g04132 385 SUPERFAMILY GroES-like 74 231 IPR011032 -
Aip03g04132 385 Gene3D - 84 381 - -
Aip03g04132 385 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 50 385 IPR044626 GO:0016628
Aip03g04132 385 Gene3D - 218 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04132 Aip-Chr3 125108985 125113169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04132 101 273 Monolignol Biosynthesis Gene Families AT4G39330 26.633 9.02e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04132 K18980 - gmx:100810816 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04132 03 125108985 125113169 Aip03g04132 03 125108985 125113169 ECH