Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04129 ATGGCTCAGAAAAAGAAGAGAGACACCGATTCTTCTTCTTCTGATTCTGATTCTTCTGATTCTTCTTCTCCGTCTTCTACTCGTCGTCAAGACAATGATGATAATAAGGACACTTCCTCTTCTTCTTCTTCATCTTCATCCGATTCTAACGGCAGCAACCGCCAAAACAAGAATCAGCGTAAAGTTAAACCGCCGCCGCCACCAATTTCTGATGCTTCCGATTCCTCACCGACTTCTCCGGCGAAGGAGGGTACTCGCTCGTCGCCATCGTCCCGGAATCCTCCACCGCCGTATGAAGATTTGACTCCACCGGAGCGCTCACCACCACCGCCAGAGGCATTGCCGCCGCCGTCACCGCCACCACCAGAAGTGTCGCCTCCACCACCACCACCACCAGAAGTGTCGCCTCCACCGCCGTCGTTTCCACCACCACTGGCACAGATACAAAGCGAAGTGGCTTCTACTCCTCCTCCTCCTCCTCCACCATATACAGCACCACCTTCTCCTCCTCCTCCTTATTCTCCTTCTCCACCTCCTCCTCCGTCTACTCCCAATGAGTCATCGCCAAGCCCCGTCCGACCCGCCTCCGCTAACTCGCAACCGAAGGCAGACCTTGCCACGGATTCACCACGGAGCTTTGGTAAAGCCACAGGCAATACTGATATGGGAAAATTTGCCGGCTATACCCTTGCTGCGGTTTTCTTCTTGGCCTTGGTGGCTGTAACTTTCTTCATGTTCAGGAAGAAGAAATCAAGAGGAGATGTCTATGGTATACCTCGCCATAATCTTCACTTTCACGTTAGACCAGGTGTTGATAGAATTTACTATGGACAGAAGGCTGGCGTTGGAAATGGACCAATATTGTCTCCCAATAGAAGCAACCATGGAAGTGCAAGAAATCCTGGAAGCAGACTTTTAGCACCTTCAGACATAGGGCAACAGGTGAATGCTCCAGTAGCCTTTAGCTATGAAGACATCTTGCAGGTAACCAATTCGTTCTCTGATGAAAACGTCATAGGTGAAGGAGGGTTTGGGCATGTTTACAAAGGGACACTGCCGGACGGAAAGGTGGTTGCGGTTAAGAAGCTAAAGGTTGGCAGCGGCCAGGGGGAAAGGGAATTCAGGGCAGAAGTGGAGATCATCAGCCGTGTCCATCACAGGCATTTGGTATCTTTAGTTGGTTATTGCATATGTGAGGATCAAAGATTGCTCGTCTATGAGTATGTTCCTAATGGGACACTCCATCATCACTTGCATGGAAGTGGAATGCCAGTGTTGACATGGGACAAGAGGTGCAAGATCGCTATTGGTGCTGCAAAGGGTTTGGCATATCTGCATGAGGAATGTATCCAAAAGATTATTCACAGAGATATTAAATCAGCAAACATACTTTTGGATGATACTTTCGAGGCTCAGGTTGCAGATTTTGGACTTGCAAGGCTAACTGACACTACCAAAAGTCATGTATCAACTAGGGTTATGGGAACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGGAAATTAACTGATAGATCAGATGTTTTCTCATTTGGGGTTGTCCTCCTTGAGCTTCTAACAGGAAGGAAACCAGTTGATGACTCTCAGCCTTTAGGAGATGAGAGTTTGGTTGAATGGGCTCGTCCGCATCTCCTCCATGCAATGGAGACACATGACTATAGTGTGCTAGTAGATCCAAGACTTCAAAATCAATTTGCGGAGGCTGAAATGCTCAGGATGATTGAGGCGGCTGCGGCTTGTGTTCGCCACTCTGCTCCTAAACGGCCTCGAATGGTTCAGGTTGTAAGAGCCTTAGATAGTGGAGCTGAAATATCTGATCTATCTAATGGGGTGAAATATGGTCACAGTACCAACTATGATTCTAACCAGTATGATAAAGACATTAGGATGTTCAGGAGAATGGCCAACGGCAGCTATGGTGGTGACTCTGATTCCGATAAGTACAGTAAAGAAAGCAGTCTCTCAAGAGAAATGTCAACTTGTGGATCCCAAAATGGATCCGGGACAAGTAGTTCTAGCAGCGACTTAGAATCCATAGCACTCACCAAGCATAGTAGAAGTTCTTCGTAG 2094 0.4785 MAQKKKRDTDSSSSDSDSSDSSSPSSTRRQDNDDNKDTSSSSSSSSSDSNGSNRQNKNQRKVKPPPPPISDASDSSPTSPAKEGTRSSPSSRNPPPPYEDLTPPERSPPPPEALPPPSPPPPEVSPPPPPPPEVSPPPPSFPPPLAQIQSEVASTPPPPPPPYTAPPSPPPPYSPSPPPPPSTPNESSPSPVRPASANSQPKADLATDSPRSFGKATGNTDMGKFAGYTLAAVFFLALVAVTFFMFRKKKSRGDVYGIPRHNLHFHVRPGVDRIYYGQKAGVGNGPILSPNRSNHGSARNPGSRLLAPSDIGQQVNAPVAFSYEDILQVTNSFSDENVIGEGGFGHVYKGTLPDGKVVAVKKLKVGSGQGEREFRAEVEIISRVHHRHLVSLVGYCICEDQRLLVYEYVPNGTLHHHLHGSGMPVLTWDKRCKIAIGAAKGLAYLHEECIQKIIHRDIKSANILLDDTFEAQVADFGLARLTDTTKSHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELLTGRKPVDDSQPLGDESLVEWARPHLLHAMETHDYSVLVDPRLQNQFAEAEMLRMIEAAAACVRHSAPKRPRMVQVVRALDSGAEISDLSNGVKYGHSTNYDSNQYDKDIRMFRRMANGSYGGDSDSDKYSKESSLSREMSTCGSQNGSGTSSSSSDLESIALTKHSRSSS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04129 697 MobiDBLite consensus disorder prediction 662 697 - -
Aip03g04129 697 Gene3D Transferase(Phosphotransferase) domain 1 409 624 - -
Aip03g04129 697 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 66 671 - -
Aip03g04129 697 MobiDBLite consensus disorder prediction 1 215 - -
Aip03g04129 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Aip03g04129 697 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 66 671 - -
Aip03g04129 697 MobiDBLite consensus disorder prediction 37 60 - -
Aip03g04129 697 MobiDBLite consensus disorder prediction 153 188 - -
Aip03g04129 697 SUPERFAMILY Protein kinase-like (PK-like) 311 606 IPR011009 -
Aip03g04129 697 SMART serkin_6 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04129 697 MobiDBLite consensus disorder prediction 285 305 - -
Aip03g04129 697 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Aip03g04129 697 MobiDBLite consensus disorder prediction 74 89 - -
Aip03g04129 697 MobiDBLite consensus disorder prediction 90 145 - -
Aip03g04129 697 MobiDBLite consensus disorder prediction 189 215 - -
Aip03g04129 697 Pfam Protein tyrosine and serine/threonine kinase 336 606 IPR001245 GO:0004672|GO:0006468
Aip03g04129 697 ProSiteProfiles Protein kinase domain profile. 333 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04129 697 MobiDBLite consensus disorder prediction 647 697 - -
Aip03g04129 697 Gene3D Phosphorylase Kinase; domain 1 304 408 - -
Aip03g04129 697 CDD STKc_IRAK 339 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04129 Aip-Chr3 125054742 125058157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04129 179 662 Trihelix Transcription Factor Family AT1G70460 58.635 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Aip03g04129 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04129 - - lang:109330554 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04129 03 125054742 125058157 Aip03g04129 03 125054742 125058157 ECH