Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04118 ATGCTTGTTGATTCCTCTATCGATTTTGTGATTCAAGCGTCTTATCTTGTGTTACAGCTGTTAGCTACTAGCATTGTGTTTTCGTCGGAGACATCCAAGATATTTCTTACTAGTTCAGGATACACAAGTGCTTCTCCAAGGATAATGTTGGGGCACAAAAATGTCTTGGATGAGGCTCGATTTCAGTATCAAACCAATGAAGCAAATCAACTGCAGTTGTTTGGGAATATACAAGCTGGATGCAATATTGACCCTGTTAGTTATGTTGGAAATGAGTATCTCAGCTCCATGTTTCGATCTAATAAACGAAGCAGAGAAGCTGAAGATATATCAAAGCAGCAAAAGCTTCAGATTTCCTTAAATTACAATGTCTGTCAGGACGAAGCTGATCGATTGGCAAATATTCCAAATCCAAATCAAGTGTCAACAGGATTGAGGCTTTCTTATGACGATGATGAGCGCAATTCTTCTGTTACTTCTGCTAGTGGTAGTATGACTGCCGCACCTTCAATCATATTATCCCTTGGTGACAATTTCAGAACCGAGCTTGATAGGCAGCAAGAAGAGCTGGACCAGTATATTCAGCTACAGAAGGACCAATTGTCAAAAGCAGTGAGAGATATGAAACAAAAACACATGACCAGTGTCTTTAATGCCATTGAGAAAGGTGTTAGCAAGAAGCTAAGGGAAAAAGATGCAGAGATAGAGAACATTAACCAGAAAAACAGGGAACTAGCAGAGAGAATAAAACAAGTATCCATCGAAGCACAGAGTTGGCACTACAAAGCAAAGTATAATGAACAAGTTGTCAACGTATTAAGGAACAATCTCCAGCAAGCAATTACACAAGGAGTCGAACAAGGAAAGGAAGGGTTCGGAGACAGTAGCGAAGTTGACGATGCCACCTCATATATCGATTTGAATAGCTTGATCAGCAATCCAGGTGCACGAATGAAATCTACTTTGAAGAAGCACCAAGGCATAGAGAATCTGATGTGCAGAGAGTGCAGGGTGAAGGAGGTTTCCATGTTGTTGATGCCTTGCAGACACTTATGCTTGTGTGACAACTGTGATAGATATATCAATGTTTGTCCTGTATGCCAATTGATGAAAACTCAAAGTGTCCAGGTGTATCTGTCTTAA 1143 0.4033 MLVDSSIDFVIQASYLVLQLLATSIVFSSETSKIFLTSSGYTSASPRIMLGHKNVLDEARFQYQTNEANQLQLFGNIQAGCNIDPVSYVGNEYLSSMFRSNKRSREAEDISKQQKLQISLNYNVCQDEADRLANIPNPNQVSTGLRLSYDDDERNSSVTSASGSMTAAPSIILSLGDNFRTELDRQQEELDQYIQLQKDQLSKAVRDMKQKHMTSVFNAIEKGVSKKLREKDAEIENINQKNRELAERIKQVSIEAQSWHYKAKYNEQVVNVLRNNLQQAITQGVEQGKEGFGDSSEVDDATSYIDLNSLISNPGARMKSTLKKHQGIENLMCRECRVKEVSMLLMPCRHLCLCDNCDRYINVCPVCQLMKTQSVQVYLS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04118 380 MobiDBLite consensus disorder prediction 134 162 - -
Aip03g04118 380 PIRSF SBP1_RNase_bind 48 380 IPR017066 -
Aip03g04118 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 315 380 IPR013083 -
Aip03g04118 380 PANTHER S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED 54 379 - -
Aip03g04118 380 ProSiteProfiles Zinc finger RING-type profile. 333 368 IPR001841 -
Aip03g04118 380 Pfam Zinc finger, C3HC4 type (RING finger) 330 368 - -
Aip03g04118 380 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 54 379 IPR017066 -
Aip03g04118 380 Coils Coil 228 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04118 Aip-Chr3 124970529 124975902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04118 329 378 C3H Transcription Factor Family AT1G73950 40.000 1.78e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04118 K19042 - mnt:21410357 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04118 03 124970529 124975902 Aip03g04118 03 124970529 124975902 ECH