Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04114 ATGGAAAATGTGCAAAATAGTATGCACTTGGTTCTCTCAACTGATGCAAAGCCAAGACTCAAATGGACTCCTGAACTTCACCAAAGATTCATCGAGGCAATTAATCAGCTTGGAGGTTCAGAAAGTGAGTATATAGTAAAAACTACAAAACAATACCCTTCTATAGAAATGAAGAACAGTGAAGGTCCTTGTAGCAGCAGGGAAGAAGGTATTGGGACACAGAATGAGATGAAAGCATGCAAATTGCTGAGGCACTCCATATGCAAATGGAAGTACAGAAGAAACTTGATGAGCAAATTGAGGTGCAGAGACATTTGA 318 0.3962 MENVQNSMHLVLSTDAKPRLKWTPELHQRFIEAINQLGGSESEYIVKTTKQYPSIEMKNSEGPCSSREEGIGTQNEMKACKLLRHSICKWKYRRNLMSKLRCRDI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04114 105 SUPERFAMILY Homeodomain-like 16 42 IPR009057 -
Aip03g04114 105 Gene3D - 16 102 - -
Aip03g04114 105 PANTHER MYB-RELATED PROTEIN 2 3 41 - -
Aip03g04114 105 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 41 IPR044848 GO:0003700
Aip03g04114 105 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 42 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04114 Aip-Chr3 124932798 124933548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04114 1 39 G2-like Transcription Factor Family AT1G69580 69.231 2.40e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aip03g04114 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04114 - - adu:107481135 112.079