Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04112 ATGAGTTGTTTCCAATGGCCGACCGTGGCTGCATTGACATCTGTTTCCAATAGCGACAATGAGGGCACGAGGCAGATGAAGTGTCAGCGGAGGATGGAGATGATACGGCCCGACGACGGCGTGACGGTAATAAAGAGGCAACGGTGCAATGGAGATGCGACGGCGCCGCAACGGTGGAATGTGATTCGGTTGTTTTTGCGTTTTAGGAGCTTGCGGTTCAATGACAAGGAAATCAATGGCATTGAGATGGTTCTTCAGGATATCAAAGGTGGTAGGATCCGTGCTTCAATCCCAAAACCATTGTTCAAGAAGTGGAGAGGTAATATTTTGGAGTTTAGCATGTACGTGATGTCTAACTTCATAGTGGTGGATAAAAAGGAGAAAATCAGGATAACTACAAATAGATGGACCATCAACTTTTCACAGAAGACCACTGTTCTTCTGGTACCTCATCCCAGTTTTCCTCTAGAGGCATTTTCTTTTAAGCCTATTATGGAGCTGCTTCAAGCTGACAAGATCGATGATTCAATACTTACAGATGTCATTGGTGAAGTGGTTGAAAAAGAGGATCCAAGAGAGTTGATTACTAGCAAAGGCAGAGAGACAAAGCGTTTGGCTATTTTGATCAAAGACCTTGAAAATAACAGTATTGGGTGTGTGTTGTCTGGAGACATGGTAGACCAAATTCTACCATATCCCGAGGGGGAAAGGGTGGAGCCTCTGATAGTTATAGCTTAA 738 0.4431 MSCFQWPTVAALTSVSNSDNEGTRQMKCQRRMEMIRPDDGVTVIKRQRCNGDATAPQRWNVIRLFLRFRSLRFNDKEINGIEMVLQDIKGGRIRASIPKPLFKKWRGNILEFSMYVMSNFIVVDKKEKIRITTNRWTINFSQKTTVLLVPHPSFPLEAFSFKPIMELLQADKIDDSILTDVIGEVVEKEDPRELITSKGRETKRLAILIKDLENNSIGCVLSGDMVDQILPYPEGERVEPLIVIA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04112 245 SUPERFAMILY Nucleic acid-binding proteins 159 229 IPR012340 -
Aip03g04112 245 Pfam Domain of unknown function DUF223 82 148 IPR003871 -
Aip03g04112 245 Gene3D - 56 147 IPR012340 -
Aip03g04112 245 CDD RPA1_DBD_A_like 66 146 - -
Aip03g04112 245 Gene3D - 153 245 IPR012340 -
Aip03g04112 245 SUPERFAMILY Nucleic acid-binding proteins 69 153 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04112 Aip-Chr3 124914124 124915947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04112 58 242 Core DNA Replication Machinery Family AT2G06510 23.684 6.54e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04112 - - ahf:112783518 255.758