Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04106 ATGGAACTTAGTAGTTCAGTTTCATGGCTACTTGGTTTACTTCTTTTGGCTATGGTGGAAATGTCTTCTTCTGCTCTTTCTCCTTCAGGGATAAATTATGAAGTTGTAGCTCTGATGGCCATTAAGAATGGCTTGAATGATCCCCATAATGTCCTTGAGAATTGGGATATCAATTCTGTTGATCCTTGTAGCTGGAGGATGATTACTTGTTCTCTAGATGGCTCCGTTTCTGCATTGGGATTGCCTAGTCAGAACTTGTCTGGTACACTATCTCCAGGGATTCAAAACCTTACTAACTTGCAATCAGTGTACTTAAAAAAGCTTGAGACACTTGACCTTTCCAATAATGCATTTAGTGGTGAGATACCAAGTTCTTTGGGAGGCCTCACAAGCCTGAACTACCTGCGGTTGAACAATAACAGCCTTACCGGAGCATGCCCTCAGTCTCTTAGTAACATTGAAGGTCTAACACTTGTGGACCTCTCTTATAACAATTTGAGTGGTTCTTTGCCAAGAGTAACAGCAAGAACATTCAAGATTGAGGGTAACCCGTTAATATGTGGTCCAAAAGCAAATAACTGTTCTAATGTGTTGCCAGAACCACTTTCCTTCCCTCCAGATGCTCTAACAGCTCAATCAGACTCTAGCAACAAAAGCCATCGTGTTGCAGTTGCTTTTGGTGCGAGTTTTGGTTCTGCTTTTATCATTGTAATTATTGTTGTGTTTCTCGTTTGGTGGCGATACAGACAGAATCAGCAGATATTCTTTGATGTTAGCGAGCAATACGACCCTGAGGTGCGCCTTGGTCATTTAAAGAGGTATTCATTCAAAGAGCTTAGAGCCGCAACAGACCATTTCAGTTCAAAGAATATTTTAGGAAAGGGTGGCTTTGGAATAGTCTACAAAGGGTGCTTGAATGATGGAACAATTGTGGCAGTTAAAAGGTTGAAGGATTACAATGCTGCTGGTGGTGAGATCCAATTTCAGACAGAGGTTGAGACAATAAGTTTGGCTGTGCACCGGAATCTTCTGCGTCTCAGTGGATTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCTTATATGTCCAATGGCAGTGTAGCCTCTAAATTAAAAGATCATGTTCATGGTCGGCCAGCCTTAGATTGGGTGAGGAGGAAGAGAATAGCGATAGGTACAGCGAGGGGGTTGGTTTATTTGCATGAACAATGTGATCCGAAAATTATTCATCGTGATGTCAAAGCAGCCAATATATTGCTAGATGAAGATTTCGAAGCAGTTGTTGGCGATTTTGGTTTGGCTAAGCTTCTGGATCACAGAGATACTCATGTGACAACTGCTGTCCGCGGAACTGTCGGCCATATTGCTCCAGAGTACTTATCAACAGGTCAGTCATCAGAGAAGACTGATGTGTTTGGGTTTGGAATCTTGCTTCTTGAGCTAATCACAGGCCATAAGGCTCTAGATTTCGGGCGAGCAGCAAACCAGAAGGGTGTCATGCTTGATTGGGTTAAGAAGCTCCACCAAGATGGAAGATTAAGCCAAATGGTGGACAAAGATCTAAGGGGAAGTTTTGATTTGCTTGAGTTGGAAGAAATGGTTCAGGTAGCACTATTATGCACACAATTCAAGCCTTCGCATCGCCCGAAGATGTCAGAAGTATTGAAGATGTTGGAAGGTGATGGATTAGCTGAGAGATGGGAGGCCTCACAGTCACACAAGAGTGAAACACCAAGGCTCCGATCTAGTAATAGTGAAAATAACCCTCAAAGATATTCAGATTTCATAGAAGAATCCTCACTCATATTAGAAGCTATGGAGCTTTCTGGCCCAAGGTGA 1842 0.4256 MELSSSVSWLLGLLLLAMVEMSSSALSPSGINYEVVALMAIKNGLNDPHNVLENWDINSVDPCSWRMITCSLDGSVSALGLPSQNLSGTLSPGIQNLTNLQSVYLKKLETLDLSNNAFSGEIPSSLGGLTSLNYLRLNNNSLTGACPQSLSNIEGLTLVDLSYNNLSGSLPRVTARTFKIEGNPLICGPKANNCSNVLPEPLSFPPDALTAQSDSSNKSHRVAVAFGASFGSAFIIVIIVVFLVWWRYRQNQQIFFDVSEQYDPEVRLGHLKRYSFKELRAATDHFSSKNILGKGGFGIVYKGCLNDGTIVAVKRLKDYNAAGGEIQFQTEVETISLAVHRNLLRLSGFCSTQNERLLVYPYMSNGSVASKLKDHVHGRPALDWVRRKRIAIGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDTHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQDGRLSQMVDKDLRGSFDLLELEEMVQVALLCTQFKPSHRPKMSEVLKMLEGDGLAERWEASQSHKSETPRLRSSNSENNPQRYSDFIEESSLILEAMELSGPR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04106 613 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Aip03g04106 613 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Aip03g04106 613 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 613 - -
Aip03g04106 613 SUPERFAMILY Protein kinase-like (PK-like) 263 560 IPR011009 -
Aip03g04106 613 MobiDBLite consensus disorder prediction 567 593 - -
Aip03g04106 613 Gene3D Transferase(Phosphotransferase) domain 1 363 578 - -
Aip03g04106 613 MobiDBLite consensus disorder prediction 577 593 - -
Aip03g04106 613 SUPERFAMILY L domain-like 32 182 - -
Aip03g04106 613 Gene3D Ribonuclease Inhibitor 33 106 IPR032675 -
Aip03g04106 613 Pfam Protein kinase domain 287 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04106 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Aip03g04106 613 Gene3D Phosphorylase Kinase; domain 1 255 362 - -
Aip03g04106 613 SMART serkin_6 286 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04106 613 ProSiteProfiles Protein kinase domain profile. 286 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04106 613 Pfam Leucine rich repeat 107 166 IPR001611 GO:0005515
Aip03g04106 613 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 613 - -
Aip03g04106 613 Gene3D Ribonuclease Inhibitor 107 197 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04106 Aip-Chr3 124824812 124828178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04106 67 613 Receptor kinase-like Gene Family AT1G60800 73.063 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Aip03g04106 Pkinase 3.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04106 - - gmx:100806943 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04106 03 124824812 124828178 Aip03g04106 03 124824812 124828178 ECH