Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04102 ATGGAGAAGATAAGCCAACAAATGCGCAGTACCGGCTACGGCACAGCAGTTACAGGGACAGGACCAGACATAAACTATGGCCTGGCACAGTGCTATGGAGATCTTTCACTTCTTGATTGTGTGTTATGTTATGCTGAGGCACGCACGGTTCTTCCTAAATGCTTCCCATACAATGGTGGCCGCATATTTCTTGATGGATGCTTCATGAGGTCTGAAAATTATAGCTTCTTTGATGAGTATGCAGGGCCAGGGGACAAGGCTGTTTGTGGCAACAAAACTAGGAAGAACTCGAGTTTTCAAGCGGCCGCGAAGCAGGCGGTTTTGGAAGTAGTTCAAGCTGCACCAAACAGCAAAGGATACTATGCAAGAGGGAAGGTCGATGTTTCTGGAAGGGTAAATGAATCTGCTTATGTTTTGGCTAATTGTTGGAAGAGTTTGAACAGTAGTTCTTGCAAAGCATGTCTTGAGAATGCTTCTAAATCTGTGTTGAAATGCTTGCCTTCTTCAGAAGGTAGAGCACTGAACACTGGCTGCTTCATGAGGTATTCTAACACAGATTTTCTTAACAAGGAGCAGAATAATGGAAGATCAAGAGGTACTCTTATAGTGATAGTGGTTGCAGTAGTTAGTGCAGTGATTGTTTTGGTAGTTGGAATAGCTATTGGGGTCTATATAAGGAAAGATAGATACATTCAAAGAAAAAGAAGAGGTTCAAATGATGCAGAGAAGTTGGCTAAGACACTTCACCGCAACAGCTTGAATTTCAAGTACTCTACACTGGAGAAGGCTTCCAACTCCTTCAACGAAGCGAACAAGCTTGGACAGGGAGGATTTGGATCGGTTTATAGAGGTGTTCTGCCTGATGGAAGAGAAATTGCCATCAAGAGGTTGTACTTCAACAACAGGCATAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGCGTGGAGCACAAGAATCTAGTGAGGTTGTTAGGATGCAGCTGTTCTGGACCCGAAAGCTTGCTCGTATATGAATTTCTACCGAACAAAAGTCTTGATCAATTTATTTTTGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGATATTATCATTGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCATAGAGATATAAAAGCCAGCAACATCTTACTGGATGCTAAACTTCGCGCCAAAATTGCTGATTTCGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGCACGGCTATAGCCGGAACTCTGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGGCAGATGTATATAGTTTTGGAGTGTTAGTCTTAGAAATAGTTACTGGGAGACAGAATAACAGAAGCAAATCAACAGAATACTCAGACAGCATAGTTATACTGACATGGAGGCATTTCCAATCAGGGACAGCAGAAGAGCTATTTGATCCAAATCTAGTTTCAGATGACAACAACAATGTTAATAAGAAGGATGAGATTTTAAGAGTGGTGCACATAGGACTTCTATGCACACAAGAGAACCCTTCCTTGAGGCCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATCTTGCACGTCCCTCTAATCCACCCTTCACAGATGAGAACACAATGGAACTCAATGACACTGTTGATAACCCATTTCGCCCTCTAAATAATGCAACATATTCATCAGAGGCTACTATGTCCCATAGTTCTTTCTATGCAAGGTGA 1788 0.42 MEKISQQMRSTGYGTAVTGTGPDINYGLAQCYGDLSLLDCVLCYAEARTVLPKCFPYNGGRIFLDGCFMRSENYSFFDEYAGPGDKAVCGNKTRKNSSFQAAAKQAVLEVVQAAPNSKGYYARGKVDVSGRVNESAYVLANCWKSLNSSSCKACLENASKSVLKCLPSSEGRALNTGCFMRYSNTDFLNKEQNNGRSRGTLIVIVVAVVSAVIVLVVGIAIGVYIRKDRYIQRKRRGSNDAEKLAKTLHRNSLNFKYSTLEKASNSFNEANKLGQGGFGSVYRGVLPDGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDQFIFDRVKGRELNWEKRYDIIIGTAEGLVYLHENSKTRIIHRDIKASNILLDAKLRAKIADFGLARSFQEDKSHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVLVLEIVTGRQNNRSKSTEYSDSIVILTWRHFQSGTAEELFDPNLVSDDNNNVNKKDEILRVVHIGLLCTQENPSLRPTMSRALQMLTKKEENLARPSNPPFTDENTMELNDTVDNPFRPLNNATYSSEATMSHSSFYAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04102 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 388 400 IPR008271 GO:0004672|GO:0006468
Aip03g04102 595 ProSiteProfiles Gnk2-homologous domain profile. 81 187 IPR002902 -
Aip03g04102 595 Pfam Protein tyrosine and serine/threonine kinase 270 540 IPR001245 GO:0004672|GO:0006468
Aip03g04102 595 Pfam Salt stress response/antifungal 89 184 IPR002902 -
Aip03g04102 595 Pfam Salt stress response/antifungal 11 74 IPR002902 -
Aip03g04102 595 ProSiteProfiles Protein kinase domain profile. 267 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04102 595 CDD STKc_IRAK 273 544 - -
Aip03g04102 595 SUPERFAMILY Protein kinase-like (PK-like) 252 563 IPR011009 -
Aip03g04102 595 ProSiteProfiles Gnk2-homologous domain profile. 1 76 IPR002902 -
Aip03g04102 595 SMART serkin_6 267 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04102 595 Gene3D Phosphorylase Kinase; domain 1 228 342 - -
Aip03g04102 595 Gene3D - 86 187 IPR038408 -
Aip03g04102 595 Gene3D - 1 76 IPR038408 -
Aip03g04102 595 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 574 - -
Aip03g04102 595 Gene3D Transferase(Phosphotransferase) domain 1 343 553 - -
Aip03g04102 595 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Aip03g04102 595 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04102 Aip-Chr3 124752708 124755830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04102 1 595 Receptor kinase-like Gene Family AT1G70520 68.729 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g04102 PK_Tyr_Ser-Thr 6.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04102 - - aip:107631343 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g04102 03 124752708 124755830 Aip03g04102 03 124752708 124755830 ECH
Aip03g04102 03 124752708 124755830 Aip06g03128 06 126772934 126775767 ECH