Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04081 ATGGGCGGCGACAACCTCAAGTTCCTCTGCAGCTACGACGGTAAAATTCTTCCCCGCTACCCCGACGGCAAGCTCCGCTACCTCGGCGGCCACACCCGCCTCCTCTCCCTCCCTCGCTCCACTGCCTTCTCCGGGCTGCTTGTGAAGCTGGGAGACCTGTGCGGTTCCCCCGTCACTCACCTCCGCTGCCAACTACCTACCGAGGACCTCGACGCCTTGGTCTCCATCACTTCCGATGAGGATCTCGCTAACCTTCTCGAGGAATACGACCGCGTTTCATCTTCCAAGATCAGGCTCTTCCTTTCCTATTCATCCACCGCCAAAACTACGCCATCCTCTTCTTCCTCTTCTTCTTCCTCATCCTCGACGTCGTCGTTTCGCGCCCAAATGTGTACCGGAACCAAGAAATCCGCTGTCACTGCGAGAAATTCCGCTTTCCCCTGCTATGGTTACCGTGTCCCGGGAAACGCCGGTGGTGTTGTTTACCTCGTAAACAACTGCAACCACTGGCACTAG 516 0.5717 MGGDNLKFLCSYDGKILPRYPDGKLRYLGGHTRLLSLPRSTAFSGLLVKLGDLCGSPVTHLRCQLPTEDLDALVSITSDEDLANLLEEYDRVSSSKIRLFLSYSSTAKTTPSSSSSSSSSSSTSSFRAQMCTGTKKSAVTARNSAFPCYGYRVPGNAGGVVYLVNNCNHWH 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04081 171 PANTHER OS05G0427100 PROTEIN-RELATED 4 137 - -
Aip03g04081 171 SUPERFAMILY CAD & PB1 domains 22 110 - -
Aip03g04081 171 Pfam PB1 domain 22 102 IPR000270 GO:0005515
Aip03g04081 171 SMART PB1_new 20 104 IPR000270 GO:0005515
Aip03g04081 171 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 4 137 - -
Aip03g04081 171 CDD PB1_UP2 9 101 - -
Aip03g04081 171 Gene3D - 24 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04081 Aip-Chr3 124460424 124462197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04081 4 109 MAP Kinase Kinase Kinase AT3G46920 43.750 1.05e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04081 - - aprc:113859578 175.637