Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04052 ATGGAGACTAAAAATGAACTAGAGCCCAAAGAAGGATTGACAATAATGCTTCCTCCACCACCTGGAACTTTCCAAGACCGTGAAGACCTCATTAAACATGTGTGTGACTTTGGTGCCAATGAAAGATATGTTGTGACCATCAAGAAGTCCAGAAAAGATAGAAGAGTCATTCTTGGATGTGACAGGAGAGGTGTCTATCATAATAGGCACAAAATTGAGGAAAGTAAGCGCAAAAGGAAAGCAACTTCACGCCTTATAAACTGTCCTTTTGAAGCCATAGCTGGTATAAAACCTCGTCAAGTGCTTAAAACTCTCAAGCAAAGCAATCTACAACTGCAGTCAACACCACGCCATTTATACAACCTCAAAGCAAAGATTCGTCAGGGAAAGCTATCAGATAAAACCTTCAAGTCATTGAGGTCAAATAGATCTATGTCTGTTGAGGGGAACAACAGTTCATCTGATGGTTCATTAAACCTAAACTACCACCTGGCAACACAAGAAGTTGTATCTCAAGTTCCTTTGACCACATATGAAGAATTTAAAGCAGCAATTGTTGCAGCCAAGCAAGCATTTCCTTCATGGAAAAACACTCCTATTACCACTCGTCAACGTATTATGTTTAAACTTCAGGATCTTATTCACAGAGATATTGATAAGCTTGCCATGAACATCACCACAGAACAAGGAAAGACATTAAAGGGTGCCAGAGGAGATGTGCTTCATGGTTTAGAGATGGTAGAGCATGCTTGTGGGATGGCAAATCTACAAATGGGAGAATTTGTTCCTAATGCTTGTAATGGAATTGATACATACTGCATCAGAGATCCCCTTGGAGTTTGTGCTGGGATATGCCCGATTAACTTTCCTGCAATGACACCCTTGTGGATGTTCCCTATCGCAATAACATGTGGCAACACTTTTATTCTTAAGCCATGTGAAAATAATCCAGGAGCTTCAATGATACTTGTAGCATTAGCAATGGAAGCTGGTTTGCCCGATGGTGTTTTAAACGTTGTACATGGAACTCATGTATGTTATACTATGCAAGAATCAAATGCAGGTGGCATAAATCATGTAGTTGTTATGCCAGATGCTAGCATGGATGCTACTTTAGATGCCCTTGTTTCTGCTGGTTTCCGTGCAGCAGGAGAGAGGTCCATGGCTTTAAACACAGCTATCTTTGTGGGAGGTTCAATGCAATGGGAAGATGAATTGGTGCAGCGTGCCAAAGCACTTAGAGTGAATGTAGGAACAGATCCTGATGCATACCTAGGTCCAGTTATTAGCAGAGAGGTAAAAGATAGGATATGTGGACTAGTTCAGAATGCTGTTGAAAATGGTGCAAGACTCCTACTTGATGGGAGGCACATTATGGTGCCTGGATATGAGAATGGAAATTTTGTTGGCCCTACTATCTTATGTGATGTCACAACCAACATGGAGTGTTACAAGGAAGAAATTTTTGGACCAGTTCTTCTTTGCATGCAGGTTTCCATTACTTACTACATATTTCATTTTTACATATATGGAAATGGAGCTTCTGTCTTCACCGACTCTGGTATGGTTGCTAGGAAGTTCCAACATGAGGTTGAAGCTGTACTGGTTGGGATCAACGTGCCTGTACCTATTCCGTTACCATTTTCCTCTAATTATGAGTCAAAAGCATCTTTTGCCGGCAATTTCAATTTTTTTGCAGGAAGAACAGGAGTACAATTTTGTACCCAAATAAAAAAAGTGGCAAAAAGATGGAAggtgttccgttcaactttggccgaggcgtgtatcttcagcgaggccgtctgctttaggagagagttataa 1824 0.3904 METKNELEPKEGLTIMLPPPPGTFQDREDLIKHVCDFGANERYVVTIKKSRKDRRVILGCDRRGVYHNRHKIEESKRKRKATSRLINCPFEAIAGIKPRQVLKTLKQSNLQLQSTPRHLYNLKAKIRQGKLSDKTFKSLRSNRSMSVEGNNSSSDGSLNLNYHLATQEVVSQVPLTTYEEFKAAIVAAKQAFPSWKNTPITTRQRIMFKLQDLIHRDIDKLAMNITTEQGKTLKGARGDVLHGLEMVEHACGMANLQMGEFVPNACNGIDTYCIRDPLGVCAGICPINFPAMTPLWMFPIAITCGNTFILKPCENNPGASMILVALAMEAGLPDGVLNVVHGTHVCYTMQESNAGGINHVVVMPDASMDATLDALVSAGFRAAGERSMALNTAIFVGGSMQWEDELVQRAKALRVNVGTDPDAYLGPVISREVKDRICGLVQNAVENGARLLLDGRHIMVPGYENGNFVGPTILCDVTTNMECYKEEIFGPVLLCMQVSITYYIFHFYIYGNGASVFTDSGMVARKFQHEVEAVLVGINVPVPIPLPFSSNYESKASFAGNFNFFAGRTGVQFCTQIKKVAKRWKVFRSTLAEACIFSEAVCFRREL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04052 607 Pfam Aldehyde dehydrogenase family 354 580 IPR015590 GO:0016491
Aip03g04052 607 Pfam Aldehyde dehydrogenase family 164 343 IPR015590 GO:0016491
Aip03g04052 607 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 94 163 IPR010061 GO:0004491
Aip03g04052 607 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 93 IPR010061 GO:0004491
Aip03g04052 607 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 1 93 - -
Aip03g04052 607 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 351 589 - -
Aip03g04052 607 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 94 163 - -
Aip03g04052 607 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 142 358 IPR016162 GO:0016491
Aip03g04052 607 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE [ACYLATING], MITOCHONDRIAL-LIKE 165 344 - -
Aip03g04052 607 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 351 589 IPR010061 GO:0004491
Aip03g04052 607 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 165 344 IPR010061 GO:0004491
Aip03g04052 607 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 359 550 IPR016163 GO:0016620
Aip03g04052 607 SUPERFAMILY ALDH-like 153 584 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04052 Aip-Chr3 124035613 124044207 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04052 165 566 Aldehyde Dehydrogenase Gene Family AT2G14170 62.471 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04052 K00140 - gmx:100796803 837.795