Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04049 ATGTCCCAAGAAGGTTTAACAGAAGAAAAGGAAGCAATGCGTGCCTATGGATGGGCTGCAAGAGATTCATCGGGAATTCTCTCCCCTTTACATTTCACCAGACGGGCAAATGGTGATACAGATATCACCATCAAGATACTCTACTGCGGGATTTGCCACTCCGATTTTCATATGCTGAAGAATGATCATGCCATAAGCATCTATCCCTTAGTCCCCGGGTATGTATATATCAAGCATGCCTTTAATACCAAAAGAATATTATTTACTTTTGTTAACATTGTATTATTTTTCAGGCATGAGATTGTGGGGCAAGTGACACAGGTGGGAAGACAAGTTACAAAATTTAAGGTTGGTGATGTGGCTGGTGTGGGTGGCATTGTGGGCACGTGCGGCACGTGTTCCAACTGCACACAGGGCTTGGAAACTTACTGCCCCAAAATGATTCTAACCTCTAGCTCACACTACCATGATGGATCAATAACCTATGGAGGCTTCTCTGATAATTTTGTTGTTGATGAGCACTTTGCCGTCACAATTCCCGAATCTATGCCTCTGCATGCCACAGCCCCTTTGTTGTGTGCTGGAATCACTGTTTACAACCCCATGTTGCACCACGGGCTCTGCAGGCCCGGTCAGCACTTGGGTGTGGTGGGCCTTGGTGGGCTCGGCCATCTGGCTGTTAAGTTTGCCAAGGCTTTTGGTATGAAGGTCACTGTTATAAGCACTTCTTCCCGGAAGAAGGAGGAAGCAATTGAACGTCTTGGTGTGGATGCCTTCTTGCTTAGTCATCAGCAACAACAATTGCAGGATGCAACCGGGACAATGGATGGGATCATTGACACAGTTTCAGCACCTCATTCTGTGTACCCTTTAGTTGGTTTATTGAAGACAGGAGGCAATTTGATATTGGTGGGTGCACCTGCAGCCTCATCTCCTGAATTACCGTCTCTGCCACTCATTATGGGGAGGAAGTCAATAAGTGGGAGTGCAGGTGGAGGAATGAGAGAGACACAAGAGATGATTGAATTTGCGGCAAAGCACAATATTAGTGCAGATGTGGAAGTTATTCCCATGGATTATGTGAACACTGCTATGGGTAGACTTGTCAACAATGATGTTCAATATCGATTCGTCATTGATGTAGCAAATACTTTGGACACTCCACGCACTAACTAA 1176 0.4549 MSQEGLTEEKEAMRAYGWAARDSSGILSPLHFTRRANGDTDITIKILYCGICHSDFHMLKNDHAISIYPLVPGYVYIKHAFNTKRILFTFVNIVLFFRHEIVGQVTQVGRQVTKFKVGDVAGVGGIVGTCGTCSNCTQGLETYCPKMILTSSSHYHDGSITYGGFSDNFVVDEHFAVTIPESMPLHATAPLLCAGITVYNPMLHHGLCRPGQHLGVVGLGGLGHLAVKFAKAFGMKVTVISTSSRKKEEAIERLGVDAFLLSHQQQQLQDATGTMDGIIDTVSAPHSVYPLVGLLKTGGNLILVGAPAASSPELPSLPLIMGRKSISGSAGGGMRETQEMIEFAAKHNISADVEVIPMDYVNTAMGRLVNNDVQYRFVIDVANTLDTPRTN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04049 391 Gene3D - 97 381 - -
Aip03g04049 391 SUPERFAMILY GroES-like 13 244 IPR011032 -
Aip03g04049 391 SMART PKS_ER_names_mod 25 370 IPR020843 GO:0016491
Aip03g04049 391 Gene3D - 18 74 - -
Aip03g04049 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 183 349 IPR036291 -
Aip03g04049 391 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 98 386 - -
Aip03g04049 391 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 4 78 - -
Aip03g04049 391 CDD CAD1 17 380 - -
Aip03g04049 391 Pfam Alcohol dehydrogenase GroES-like domain 40 178 IPR013154 -
Aip03g04049 391 Gene3D - 194 351 - -
Aip03g04049 391 PANTHER ALDEHYDE REDUCTASE 98 386 - -
Aip03g04049 391 PANTHER ALDEHYDE REDUCTASE 4 78 - -
Aip03g04049 391 Pfam Zinc-binding dehydrogenase 221 345 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04049 Aip-Chr3 124002226 124003612 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04049 14 391 Monolignol Biosynthesis Gene Families AT4G37990 58.466 3.00e-143 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04049 - - aip:107621738 679.093