Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04042 ATGGAGCATCCAAGAAAGGCTTTTGGTTGGGCAGCTAGGGACGCATCTGGCATTCTCTCCCCCTTCAACTTCTCAAGAAGGGAAACTGGAGACAAAGATGTTACTTTCAAAGTGCTCTACTGTGGGATATGCCACTCAGATCTCCACATGCTCAAGAACGAATGGGGCAACTCAACTTACCCCTTAGTACCTGGGCATGAGATTGTGGGGATAGTAACAGAGGTGGGAAGTAAGGTAGAAAAGTTAAGGTTGGAGACAAGGTGGGAGTTGGGTGCATGGTCCAATCTTGCCGCAACTGCCAAAACTGCGCACACGATCTTGAAAACTACTGTCCACAAATGGTCCTCACGTACGGCGCCAAGAACGTTGATGACACCATCACCTATGGAGGTTACTCAGATTTCATGGTTGCCGACGAACACTTTGTGA 429 0.4848 MEHPRKAFGWAARDASGILSPFNFSRRETGDKDVTFKVLYCGICHSDLHMLKNEWGNSTYPLVPGHEIVGIVTEVGSKVEKLRLETRWELGAWSNLAATAKTAHTILKTTVHKWSSRTAPRTLMTPSPMEVTQISWLPTNTL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04042 142 Pfam Alcohol dehydrogenase GroES-like domain 32 84 IPR013154 -
Aip03g04042 142 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 2 92 - -
Aip03g04042 142 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 65 79 IPR002328 GO:0008270|GO:0016491
Aip03g04042 142 Gene3D - 10 96 - -
Aip03g04042 142 PANTHER ALDEHYDE REDUCTASE 2 92 - -
Aip03g04042 142 SUPERFAMILY GroES-like 3 83 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04042 Aip-Chr3 123960593 123961165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04042 5 93 Monolignol Biosynthesis Gene Families AT4G37990 69.663 4.50e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04042 - K23232 mnt:21385910 164.851