Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g04031 ATGATGGAGAAATCAGATAATTTGGTATTATTAAGACAGGTTGTGCCATATGTCTTATGTTTGTGCATATTTATCAGATCAGCTTCTGCAAGTGAAGGATTTGAGAGCATAGCATGCTGTGCTGATTCAAACTATAAAGATCCATTGACCAACTTAGATTACAAAACAGATTATGCTTGGGGCACATTTCCATCTGAAAATGAACCAGGTAAAGGTTCCTTTGGTGTTTCTATAGGGGTAACAGTGTTAGGTACAGTGAGATCATCATCGCAGGACTTGAGAATTGAAGGAGTTTTCAGAGCCACAAAGAACAACACAGACTTTTGCCTAGTGACAGAAGAGGGTAACCCTTATATATCTCAGCTTGAGCTAAGATCAGTGTCTGAAGAGTATCTGCAGGGTTTGAATTCTAGTGTCCTGAAGCTGATCAACAGAAGTAATCTTGGGGGAAAAGAAGATGACATAAGGTACCCAATTGATCAAAGTGATAGAATCTGGAAAAGAACTACTACAAGTCCATACACTCCTATATCATTCAATATTAGCATTTTGGACCACAAATCTAATGTGACACCTCCTCTGAAAGTTCTACAAACAGCTTTGACTCACCCTGAAAGGTTGGAATTCAATCACAATGGCCTTGAGGTTAAGGAGGATTACGAGTACCTTGTGTTTCTCTACTTCCTTGAATTGAATAACAGTGTTAGAGAAGGCCTAAGAGTGTTTGACATCTATGTTAACAGTGAGATTAAGAAGGCTAGTTTTGATGTATTAAGTGAAGGGTCAAATTATAGACACATTGTGTTGAATGCTTCTTCAGCAAATGGATCACTTAATCTAACATTGGTCAAGGCATCTGGATCTGTGTTTGGACCCTCTTGTAATGCTTATGAGATCATGCAGGTGCGACCATGGAAGCAAGAAACCAACCAAACAGATTTGGTGGCGATTTTGAAGATAAGAGAAGAACTAATCACTGAAAACCATGATAACAAAGTCCTACAAAGCTGGACCGGTGACCCATGCATGCTTTTTGCATGGCAAGGAATATCATGTGATTTTTCCAATGATGCACCTGTTATCATTAAGCTGGATCTTTCCTTAAGTAATCTGAAAGGACCACTTCCATCCAGTGTCACAGAGTTGACTAACTTACAAATAATGAACCTTAGCCACAACAACTTCAATGGCCATATCCCCTCATTTCCAAGTTCCTCAATGCTCACTTCACTAGATCTGAGATACAATGATCTTATGGGGTCACTTCCACCGTCATATAACTCACTGCCACATTTAAAGTCAATATATTATGGCTGCAATGATCGCATGGACCATAAGCTTTCAGGAAACTTGAACATTTCAATCAATACAGATAATGGAAGTTGTCAGAAAGGGAATGATTTTCCACAACAAGTAGCAATTATTTCAGCCGTTGCATGTGGCTCTTTCTTGATTGCTATGGCTGTTGGAACAATTTTCATTTATCGTTATAGACAGAGATTAAATCCATTGGAAGCATTTGGAAGAAAAAGCAACCCAATGATAACAAATGTGATATTCTCATTGAACAGCATAGACGATTTCTTGATAAAATCTATTTCAATTCAAGCATTCACTTTGGAATATATAGAGGTTGCAACCGAAAAGTACAACATTTTGATAGGTGAAGGAGGCTTTGGTTCTGTCTACCGTGGCACCCTAGAAAATGGTCAAGTTGTGGCTGTGAAGGTTCGGTCAGCCACATCAACGCAAGGCACTCGAGAATTTGATAATGAGCTAAACCTGCTTTCTGCAATAAGGCATGAGAACCTGGTGCCTCTTCTTGGTTATTGTAATGAAAATGACCAACAAATTCTGGTTTATCCTTTTATGTCCAATGGCTCTCTGCAAGATAGACTATATGGAGAACCTGCAAAGAGAAAAATACTAGACTGGCCAACCAGACTGTCTATTGCTCTTGGTTTGGCATATTTGCACTCGTTCCCTGAGCGATCTGTAATTCACAGGGATGTGAAATCAAGCAATATACTTTTGGATCACAGCATGTGTGCTAAGGTTGCAGATTTTGGTTTTTCAAAATATGCTCCACAGGAAGGAGACAGTGCTGTTTCGCTTGAAGTAAGAGGAACTGCAGGATATCTTGATCCTGAGTACTACACAACCCAGCAATTATCTGCAAAGAGTGATGTCTTCAGCTTTGGTGTGGTTCTTCTTGAAATTGTGAGTGGCCGGGAGCCTCTCAACATCCATAGACCGCGGAATGAGTGGAGTTTGGTTGAATGGGCTAAACCGTACATAAGGGCATCAAAGATTGAGGAAATTGTGGATCCTGGCATCAAGGGAGGGTACCATGCAGAAGCAATGTGGAGAGTGTTGGAAGTAGCACTGCAATGTGTTGAACCTTTCTCAACAAATAGACCGGCCATGGATGACGTCATGCGCGAGTTGGAGGATGCTCTGATCATAGAAAACAATGCATCGGAGTACATGAAGTCCATAGAGAGCCTTGGATCCAACCGTTACTCTATTGTCATAGAGAAAAGGGTGCCACCCTCGACCTCGTCAATGGTAGAATCAACCATCATACCTCAATCCTTGAACCATCCGCAGCCGAGGTAG 2619 0.4074 MMEKSDNLVLLRQVVPYVLCLCIFIRSASASEGFESIACCADSNYKDPLTNLDYKTDYAWGTFPSENEPGKGSFGVSIGVTVLGTVRSSSQDLRIEGVFRATKNNTDFCLVTEEGNPYISQLELRSVSEEYLQGLNSSVLKLINRSNLGGKEDDIRYPIDQSDRIWKRTTTSPYTPISFNISILDHKSNVTPPLKVLQTALTHPERLEFNHNGLEVKEDYEYLVFLYFLELNNSVREGLRVFDIYVNSEIKKASFDVLSEGSNYRHIVLNASSANGSLNLTLVKASGSVFGPSCNAYEIMQVRPWKQETNQTDLVAILKIREELITENHDNKVLQSWTGDPCMLFAWQGISCDFSNDAPVIIKLDLSLSNLKGPLPSSVTELTNLQIMNLSHNNFNGHIPSFPSSSMLTSLDLRYNDLMGSLPPSYNSLPHLKSIYYGCNDRMDHKLSGNLNISINTDNGSCQKGNDFPQQVAIISAVACGSFLIAMAVGTIFIYRYRQRLNPLEAFGRKSNPMITNVIFSLNSIDDFLIKSISIQAFTLEYIEVATEKYNILIGEGGFGSVYRGTLENGQVVAVKVRSATSTQGTREFDNELNLLSAIRHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGLAYLHSFPERSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSAVSLEVRGTAGYLDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKPYIRASKIEEIVDPGIKGGYHAEAMWRVLEVALQCVEPFSTNRPAMDDVMRELEDALIIENNASEYMKSIESLGSNRYSIVIEKRVPPSTSSMVESTIIPQSLNHPQPR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g04031 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 666 678 IPR008271 GO:0004672|GO:0006468
Aip03g04031 872 Pfam Leucine rich repeat N-terminal domain 311 353 IPR013210 -
Aip03g04031 872 CDD STKc_IRAK 554 817 - -
Aip03g04031 872 SUPERFAMILY Protein kinase-like (PK-like) 528 816 IPR011009 -
Aip03g04031 872 Gene3D - 141 303 - -
Aip03g04031 872 Pfam Malectin-like domain 71 302 IPR024788 -
Aip03g04031 872 Gene3D Phosphorylase Kinase; domain 1 521 623 - -
Aip03g04031 872 ProSitePatterns Protein kinases ATP-binding region signature. 554 576 IPR017441 GO:0005524
Aip03g04031 872 ProSiteProfiles Protein kinase domain profile. 548 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04031 872 Gene3D Transferase(Phosphotransferase) domain 1 624 837 - -
Aip03g04031 872 Pfam Protein tyrosine and serine/threonine kinase 553 816 IPR001245 GO:0004672|GO:0006468
Aip03g04031 872 PANTHER OS05G0525400 PROTEIN 86 834 - -
Aip03g04031 872 Gene3D Ribonuclease Inhibitor 310 463 IPR032675 -
Aip03g04031 872 SMART serkin_6 548 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g04031 872 SUPERFAMILY L domain-like 329 444 - -
Aip03g04031 872 PANTHER OS07G0107800 PROTEIN-RELATED 86 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g04031 Aip-Chr3 123851755 123856829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g04031 104 852 Receptor kinase-like Gene Family AT3G46400 35.332 3.91e-111 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Aip03g04031 PK_Tyr_Ser-Thr 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g04031 - - gmx:100781986 1190.64